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Figure 7 | BMC Genomics

Figure 7

From: Multiway real-time PCR gene expression profiling in yeast Saccharomyces cerevisiae reveals altered transcriptional response of ADH-genes to glucose stimuli

Figure 7

Kohonen self-organizing maps for the augmented wild-type , HXT-HXT7 and HXT-TM6* yeast. A map with six cells was used to force classification into six groups. A learning rate of 0.10, 2 neighbors and 10000 iterations were used. This gave the following groups: (1, 1) FBP1, ADH2, MDH2 (all strains), SUC2 (HXT-HXT7) HSP12 (HXT-HXT7 and HXT-TM6*), ADH3 (wild-type and HXT-HXT7) and ADH5 (wild-type); (1, 2) SUC2 (HXT-TM6*), HSP12 (wild-type) and ADH4 (HXT-HXT7); (1, 3) ADH1, PDC1, TPI1 (all strains), MIG1 (wild-type and HXT-HXT7), PGK1 (wild-type), ADH4 (HXT-TM6*) (2, 1) CYC1 (all strains), SUC2 (wild-type), ADH5 (HXT-HXT7 and HXT-TM6*), ADH3 (HXT-TM6*); (2, 2) PGK1 (HXT-TM6*); (2, 3) MIG1 (HXT-HXT7), PGK1 (HXT-HXT7), ADH4 (wild-type), ADH6 (all strains). The following colors and symbols are used: Glucose-induced genes (blue), glucose-repressed genes (red), ADH3-6 (yellow), HSP12 (black), CYC1 (green), wild-type (circles), HXT-HXT7 (squares) and HXT-TM6* (triangles).

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