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Table 3 Differentially expressed genes between sexes at FDR < 0.05

From: Transcriptome architecture across tissues in the pig

Gene

Symbol

Probe

z-score

Function, GO-process

DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked

DDX3Y

Ssc.7473.1.A1_at

20.96

Nucleoside-triphosphatase activity

Eukaryotic translation initiation factor 2, subunit 3 gamma,

EIF2S3

Ssc.16426.1.S1_at

20.19

Protein metabolism/translation regulator activity

FAM5C – family with sequence similarity 5, member C

FAM5C

Ssc.6667.1.A1_at

-18.80

Unknown

Eukaryotic translation initiation factor 1A, Y-linked

EIF1AY

Ssc.26799.1.S1_at

18.77

Translational initiation/translation regulator activity

DENN/MADD domain containing 4A

DENND4A

Ssc.13426.1.A1_at

-18.07

Regulation of transcription, DNA-dependent

Protein tyrosine phosphatase, receptor type, M

PTPRM

Ssc.31029.1.A1_at

-16.39

Protein amino acid dephosphorylation/protein tyrosine phosphatase activity

Latrophilin 2

LPHN2

Ssc.21512.1.A1_at

-15.40

Neuropeptide signaling pathway/signal transducer activity

Homeodomain interacting protein kinase 2

HIPK2

Ssc.2434.1.A1_at

-14.25

Positive regulation of programmed cell death/transcription regulator activity

Circadian locomoter output cycles kaput; clock homolog

CLOCK

Ssc.4897.1.A1_at

-14.10

Circadian rhythm/transcription regulator activity

Thymosin, beta 4, X-linked

TMSB4X

Ssc.27304.1.S1_at

12.26

Cytoskeleton organization and biogenesis/actin binding

Ubiquitously transcribed tetratricopeptide repeat gene, Y-linked

UTY

Ssc.27236.1.S1_at

11.10

Unknown. Positive regulation of growth rate (C. elegans)

Jumonji, AT rich interactive domain 1C

JARID1C

Ssc.21814.1.S1_at

8.41

Regulation of transcription, DNA-dependent/oxidoreductase activity

Ubiquitously transcribed tetratricopeptide repeat, X chromosome

UTX

Ssc.15821.1.S1_at

7.45

Unknown. Positive regulation of growth rate (C. elegans)

Glutathione S-transferase A1

GSTA1

Ssc.16377.1.A1_at

6.67

Glutathione metabolism/transferase activity

Major histocompatibility complex, class I, A

HLA-A

Ssc.13780.11.S1_x_at

4.81

Antigen processing, endogenous antigen via MHC class I/MHC class I receptor activity

Major histocompatibility complex, class I, B

HLA-B

Ssc.18552.1.S1_at

4.39

Antigen processing, endogenous antigen via MHC class I/MHC class I receptor activity

Major histocompatibility complex, class I, B

HLA-B

Ssc.18554.1.S1_x_at

-4.38

Antigen processing, endogenous antigen via MHC class I/

Zinc finger protein, X-linked

ZFX

Ssc.26228.1.S1_at

4.19

Regulation of transcription/transcriptional activator activity

Hypothetical protein FLJ20035

Q8IY21

Ssc.18924.1.A1_at

-3.95

Unknown

  1. z – scores correspond to male minus female contrasts.