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Table 2 List of mouse MHC class Ib genes analysed in this study

From: Major histocompatibility complex (Mhc) class Ib gene duplications, organization and expression patterns in mouse strain C57BL/6

Gene name

mRNA sequences referred

Used in this study

Others

NCBI accession

Ensembl transcript ID

NCBI accessions determined in this study

Q1 (GS7)

 

U96752

ENSMUST00000073208

-

Q2 (GS8)

 

AY989880

ENSMUST00000074806

AB266872

Q4 (GS9,10)

Qb-1

XR_034205

ENSMUST00000113887

AB267092, AB266873

Q5

 

-

ENSMUST00000040240

-

Q6

 

NM_207648

ENSMUST00000091611

-

Q7

Qa-2, Ped

NM_010394

ENSMUST00000071951

-

Q10

 

AK131620

ENSMUST00000068291

-

T24 (GS31)

 

NM_008207

ENSMUST00000066488

-

T23 (GS32)

Qa-1

 

ENSMUST00000102678

AB359230

T22 (GS33)

 

AK133985

ENSMUST00000058801

AB359229

T15 (GS14-2)

 

-

ENSMUST00000113742

AB359227

T13

Bl, blastocyst MHC, T25

AY989821

ENSMUST00000025333

-

T11 (GS12)

 

XM_975970

ENSMUST00000079918

-

T10 (GS13)

 

NM_010395

ENSMUST00000074201

-

T9 (GS14-1)

 

-

-

AB267093

T7 (GS16)

 

NM_001025208

ENSMUST00000064686

-

T5 (GS17)

 

NM_001081032

ENSMUST00000040467

AB359231

T3 (GS18)

TL

AK033602

ENSMUST00000025312

-

M5 (GS23)

CRW2

XM_903477

ENSMUST00000113667

AB359228

M3 (GS24)

Hmt

NM_013819

ENSMUST00000038580

AB267096

M2

Thy19.4

AY302212

ENSMUST00000077662

-

  1. Haplotype b (C57BL/6) was used. Nomenclature of each gene was based on the previous reports [23, 26], except for GS number. The H2 prefixes were omitted. The GS numbers in parenthesis represent the gene sequence numbers used in our laboratory.