Figure 1

The complete gene regulatory network of C. glutamicum visualized with Cytoscape. This figure shows parts of the complete gene regulatory network of Corynebacterium glutamicum imported by using the CoryneRegNetLoader plugin. The two highlighted nodes in yellow are those selected from the COMA results table (right). Nodes correspond to genes, edges to gene regulatory interactions. Cytoscape has been configured to visualize activations as green edges and repressions as red edges respectively. The relative gene expression levels are continously mapped to the node colors: red – underexpressed, green -overexpressed, and blue – no significant differential gene expression.