Figure 4
From: Sub-grouping and sub-functionalization of the RIFIN multi-copy protein family
Function shift analysis of A- and B- RIFIN proteins. (A) Sample sequences from the high stringency global alignment available as Additional file 4. Columns with Orange-Blue represent RSS; columns with yellow-green represent CSS; columns with Salmon-green represent both RSS and CSS. (B) Plots of Z-scores and U-values, for CSS (red curve) and RSS (blue curve) respectively, according to alignment position. The predicted consensus secondary structure is plotted with pink and green bars representing helices and loops, respectively. The heights of the bars indicate conserved predictions. Arrows correlate the highest scoring shifted sites with secondary structure predictions.