Skip to main content

Table 3 Primer sequences that define fragments amplified by PCR and used as hybridization probes.

From: The abundant extrachromosomal DNA content of the Spiroplasma citri GII3-3X genome

Primers

Nucleotide sequence (5'-3')

Accession no.

Probe's name

ScARP-2a-F

AAATATTAGTGGTGATATTTATAGAA

AJ969072

2a

ScARP-2a-R

TTATAGATTCTATGTCATCGC

AJ969072

 

ScARP-2b-F

CAATATTAGTGGTTCTATTTATATAA

AJ969073

2b

ScARP-2b-R

CTGCAAGGGAATTTATTTGTG

AJ969073

 

ScARP-3a-F

TTTTATACCAAAGGATATTGTTTCTT

AJ969069

3a

ScARP-3a-R

TGCAAGAGATTTAACATCTA

AJ969069

 

ScARP-3b-F

CGGAGTTAATGATAAAGTTCAATCAA

AJ969073

3b

ScARP-3b-R

TACAAGCGAGTTTATTTGCC

AJ969073

 

ScARP-3c-F

CGGAGTTAGTGATAAAGTTAATGCAA

AJ969071

3c

ScARP-3c-R

AGTTATTGAAATAATATCAC

AJ969071

 

ScARP-3d-F

GGGATAAGTAATAATGCTTATTCAC

AJ969070

3d

ScARP-3d-R

CAAAAACTAGGTAATTAACATTAAC

AJ969070

 

ScARP-4a-F

CTAAAAAAGATGTTACAACTGG

AJ969072

4a

ScARP-4a-R

ACGCATTCCAGCGTTAGACC

AJ969072

 

ScARP-5a-F

AAATATTAATGTCTCTTCTTTAAAAA

AJ969073

5a

ScARP-5a-R

CACAAAGACACCATTACTTG

AJ969073

 

32F1-

TAACGAATTAAATCATTCTAATAGC

AJ969074

p32

32R

TAGTTCCGGCTTGCTCACCA

AJ969074

 

Rep-F

GCTAATAAATTAACTCGCAA

AJ969070

U

Rep-R

TTTTCCATTTTTAACTCCCGC

AJ969070

 

pSciA-F

CCAAAAATCTAGGGCGACGA

AJ967634

A

PSciA-R

TATTGAATTGTCCCACTGCT

AJ967634

Â