Table 2 Genes in schizophrenia linkage sites with significantly altered expression in the STG in schizophrenia.
From: Altered gene expression in the superior temporal gyrus in schizophrenia
SZ Linkage Site | GenBank ID | Name | Symbol | Cytoband | # pairs changed/7 | Average fold change |
|---|---|---|---|---|---|---|
1q21-q22 | NM_006271 | S100 calcium binding protein A1 | S100A1 | 1q21 | 5 | -1.70 |
| Â | NM_014624 | S100 calcium binding protein A6 (calcyclin) | S100A6 | 1q21 | 4 | -2.36 |
| Â | J03651 | Mucin 1, transmembrane | MUC1 | 1q21 | 4 | -1.94 |
| Â | AF131738 | Hypothetical LOC440675 | Â | 1q21.1 | 6 | 2.05 |
| Â | AJ009640 | Sorting nexin family member 27 | SNX27 | 1q21.3 | 6 | -2.13 |
| Â | AK001560 | Immunoglobulin superfamily, member 4B | IGSF4B | 1q21.2-q22 | 4 | -2.19 |
| Â | NM_014328 | RUN and SH3 domain containing 1 | RUSC1 | 1q21-q22 | 5 | -3.03 |
| Â | AB040968 | Hyperpolarization activated cyclic nucleotide-gated potassium channel 3 | HCN3 | 1q22 | 5 | 1.95 |
1q32-q42 | AK024293 | Hypothetical gene AK024293 | AK024293 | 1q32.1 | 4 | 1.82 |
| Â | AB037804 | KIAA1383 | KIAA1383 | 1q42.2 | 6 | 4.09 |
5q21-q34 | NM_014945 | Actin binding LIM protein family, member 3 | ABLIM3 | 5q32 | 4 | -2.29 |
| Â | AB032364 | Early B-cell factor | EBF | 5q34 | 5 | 1.91 |
6p24-p21 | AJ277276 | Transcriptional regulating factor 1 | TRERF1 | 6p21.1-p12.1 | 4 | -2.38 |
| Â | AB033072 | Leucine rich repeat and fibronectin type III domain containing 2 | LRFN2 | 6p21.2-p21.1 | 4 | -2.38 |
| Â | AB002379 | Dishevelled associated activator of morphogenesis 2 | DAAM2 | 6p21.2 | 4 | 1.69 |
| Â | AF024699 | Zinc finger protein 193 | ZNF193 | 6p21.3 | 6 | 3.73 |
| Â | NM_014260 | HLA class II region expressed gene KE2 | HKE2 | 6p21.3 | 4 | -2.18 |
| Â | AK024858 | LEM domain containing 2 | LEMD2 | 6p21.31 | 4 | -2.27 |
| Â | AF085841 | Proline-rich transmembrane protein 1 | C6orf31 | 6p21.32 | 5 | -2.47 |
| Â | AK026291 | Ribonuclease P 21 kDa subunit | RPP21 | 6p21.33 | 5 | -2.17 |
| Â | NM_003520 | Histone 1, H2bn | HIST1H2BN | 6p22-p21.3 | 6 | 5.01 |
| Â | AK023284 | Testis expressed sequence 27 | TEX27 | 6pter-p22.3 | 7 | 4.17 |
6q12-q26 | AK026849 | Squamous cell carcinoma antigen recognized by T cells 2 | TSPYL1 | 6q22-q23 | 4 | -3.79 |
| Â | AK026490 | RAB32, member RAS oncogene family | RAB32 | 6q24.3 | 5 | -1.91 |
8p22-p21 | NM_002027 | Farnesyltransferase, CAAX box, alpha | FNTA | 8p22-q11 | 4 | 1.72 |
| Â | NM_015458 | Myotubularin related protein 9 | MTMR9 | 8p23-p22 | 4 | -2.21 |
13q13-q32 | AF097645 | DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 | DDX26 | 13q14.12-q14.2 | 6 | 3.49 |
22q11-q13 | AK022886 | Activating signal cointegrator 1 complex subunit 2 | ASCC2 | 22q12.1 | 5 | 1.96 |
| Â | NM_000967 | Ribosomal protein L3 | RPL3 | 22q13 | 5 | -3.65 |
| Â | NM_002305 | Lectin, galactoside-binding, soluble, 1 (galectin 1) | LGALS1 | 22q13.1 | 4 | -3.11 |
| Â | AK025423 | Hypothetical protein MGC52010 | MGC52010 | 22q13.1 | 5 | -1.67 |
| Â | NM_002676 | Phosphomannomutase 1 | PMM1 | 22q13.2 | 6 | -2.52 |
| Â | NM_002490 | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 | NDUFA6 | 22q13.2-q13.31 | 5 | -2.83 |
| Â | AK026892 | Ceramide kinase | CERK | 22q13.31 | 5 | -1.83 |