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Table 1 Homologous protein families from the Lipase Engineering Database.

From: Analysis of the distribution of functionally relevant rare codons

LED ID Homologous family name No. of RCRRs No. of sequences PDB-entry
abH01.02 Mammalian carboxylesterases 10 9 1K4Y
abH08.14 Ccg1/TafII250-interacting factor B like 2 9 1IMJ
abH09.02 BioH protein like 0 10 1M33
abH12.01 Hydroxynitrile lyases 3 10 1QJ4
abH14.02 Gastric lipases 0 10 1HLG
abH15.02 Burkholderia cepacia lipase like 6 7 4LIP
abH17.01 Chloroflexus aurantiacus lipase like 3 7 -
abH19.01 Palmitoyl-protein thioesterase 1 like 4 8 1EXW
abH23.01 Rhizomucor mihei lipase like 0 10 1DU4
abH24.01 Pseudomonas lipases 2 8 -
abH26.01 Deacetylases 0 7 1ODT
abH28 Prolyl endopeptidases 0 9 1O6F
abH30.01 Cocaine esterases 0 8 1L7Q
abH31.02 Carboxymethylenebutenolidases 0 8 1DIN
abH33.01 Antigen 85-C 0 10 1DQZ
abH34.02 Serine carboxypeptidase II like 7 9 1GXS
  1. All families are listed with their internal unique identifier (LED ID), their family name, the number of predicted RCRRs, the number of sequences in this family, and the PDB entry used to assign predicted RCRRs to secondary structure elements.