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Table 8 Enzymes of macromolecule hydrolysis

From: Genomics of an extreme psychrophile, Psychromonas ingrahamii

Macromolecule

Gene

Enzyme

Peptides, protein

3027

D-alanyl-D-alanine carboxypeptidase, serine-type

 

3293

D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase

 

314

O-sialoglycoprotein endopeptidase

 

3325

prepilin peptidase type 4

 

894

aminoacyl-histidine dipeptidase

 

1331

aminopeptidase

 

2545

aminopeptidase M24

 

2344

aminopeptidase N

 

1777

aspartyl aminopeptidase

 

1034

carboxypeptidase thermostable

 

2765

deacylase/carboxypeptidase family member, Zn-dependent

 

409

dipeptidase

 

395

leucyl aminopeptidase

 

2026

metallopeptidase M24 family

 

3003

methionine aminopeptidase, type I

 

212

oligopeptidase A

 

633

oligopeptidase B

 

2690

peptidase

 

1673

peptidase C1A, papain

 

2671

peptidase C26

 

268

peptidase M14, carboxypeptidase A

 

2457

peptidase M14, carboxypeptidase A

 

2444

peptidase M15B

 

3480

peptidase M16 domain protein

 

2127

peptidase M19, renal dipeptidase

 

2301

peptidase M22, glycoprotease

 

1544

peptidase M23B

 

3212

peptidase M23B

 

3225

peptidase M23B

 

676

peptidase M23B, peptidoglycan-binding

 

2784

peptidase M24

 

1800

peptidase M48, Ste24p

 

926

peptidase M48, Ste24p, Zn-dependent, TPR repeats

 

686

peptidase M50

 

3180

peptidase M50

 

1350

peptidase M56, BlaR1

 

2144

peptidase M6, immune inhibitor A

 

2723

peptidase S1 and S6, chymotrypsin/Hap

 

994

peptidase S16, LON domain protein

 

925

peptidase S49

 

1972

peptidase S49, N-terminal domain protein

 

1301

peptidase U32

 

2189

peptidase U32 family

 

2460

peptidase dimerization domain protein

 

410

peptidase domain protein

 

478

prepilin peptidase dependent protein D

 

606

proline aminopeptidase P II

 

253

proline iminopeptidase

Polysaccharides

1954

alpha amylase, catalytic region

 

3067

predicted glucoamylase I (alpha-1,4-glucan glucosidase)

 

2381

alpha-D-1,4-glucosidase

 

2383

dextran glucosidase

 

554

glucan endo-1,3-beta-D-glucosidase

 

893

glycogen debranching enzyme

 

2363

glycogen debranching enzyme

 

3070

glycogen debranching enzyme

 

558

glycoside hydrolase family

 

2014

glycoside hydrolase family

 

2529

glycoside hydrolase family

 

2841

glycoside hydrolase family

Murein

1782

gamma-D-glutamate-meso-diaminopimelate muropeptidase

 

1075

lytic murein transglycosylase

 

499

lytic murein transglycosylase, catalytic

 

293

lytic transglycosylase, catalytic protein

 

3319

lytic transglycosylase, catalytic protein

 

293

lytic transglycosylase, catalytic protein

 

367

lytic transglycosylase, catalytic protein

 

3319

lytic transglycosylase, catalytic protein

Lipids

1779

esterase/lipase/thioesterase family protein

 

1892

lipase, class 3

 

2631

lipase-like

 

2470

lipase/acylhydrolase family protein, GDSL-lilke

 

258

phospholipase

 

3493

phospholipase A(1)

 

2455

phospholipase D/transphosphatidylase

 

1334

phospholipase family, patatin-like protein

 

1844

phospholipase family, patatin-like protein

 

3290

predicted lysophospholipase

Nucleic acids

2776

5'-3' exonuclease

 

201

ATP-dependent endonuclease of the OLD family

 

501

DNA mismatch repair endonuclease mutH

 

2451

HNH endonuclease

 

317

TatD-related deoxyribonuclease

 

807

TatD-related deoxyribonuclease

 

716

crossover junction endodeoxyribonuclease

 

1096

deoxyribonuclease of TatD family

 

732

endonuclease III

 

1020

endonuclease/exonuclease/phosphatase

 

1518

endonuclease/exonuclease/phosphatase

 

2456

endonuclease/exonuclease/phosphatase

 

2694

endonuclease/exonuclease/phosphatase

 

3327

endonuclease/exonuclease/phosphatase

 

416

endoribonuclease L-PSP

 

2129

endoribonuclease L-PSP

 

2646

endoribonuclease L-PSP

 

369

excinuclease ABC, A subunit

 

2085

excinuclease ABC, A subunit

 

1082

excinuclease ABC, B subunit

 

1193

excinuclease ABC, C subunit

 

2436

exodeoxyribonuclease I

 

1319

exodeoxyribonuclease III

 

1460

exodeoxyribonuclease V, alpha subunit

 

1459

exodeoxyribonuclease V, beta subunit

 

1458

exodeoxyribonuclease V, gamma subunit

 

2951

exodeoxyribonuclease VII, large subunit

 

2238

exodeoxyribonuclease VII, small subunit

 

1303

exonuclease SMC domain protein

 

1302

exonuclease SbcCD, D subunit

 

2586

exonuclease of the beta-lactamase domain protein

 

2270

exoribonuclease II

 

2580

extracellular deoxyribonuclease

 

53

formamidopyrimidine-DNA glycosylase

 

2029

predicted endoribonuclease L-PSP

 

2233

predicted exonuclease

 

3302

single-stranded-DNA-specific exonuclease

 

1283

uracil-DNA glycosylase

 

1819

predicted ribonuclease BN

 

3482

predicted ribonuclease BN

 

1668

ribonuclease D

 

496

ribonuclease H

 

2962

ribonuclease HII

 

640

ribonuclease III

 

3609

ribonuclease P protein component

 

3479

ribonuclease PH

 

3417

ribonuclease R

 

2450

ribonuclease T

 

1126

ribonuclease, Rne/Rng family

 

2208

ribonuclease, Rne/Rng family

 

2214

tRNA-guanine transglycosylase

 

2567

nuclease (SNase domain protein)

 

2838

nuclease (SNase domain protein)

 

265

exonuclease, RNase T and DNA polymerase III

 

968

exonuclease, RNase T and DNA polymerase III

 

3335

exonuclease, RNase T and DNA polymerase III