Table 3 Summary of ESTs derived from Athila elements
From: How Athila retrotransposons survive in the Arabidopsis genome
Family | Most similar genomic DNA | ESTs |
|---|---|---|
I | AF272705b (env) | EG477448, EG477439, EG477443, EG477438, EG477426 |
I | AB005248 (env) | EG477445 |
IIIa | AC007166.6 (env) | EG526171, EG526175, EG526169, EG526179, EG526177, EG526176, EG526150 |
IIIb | AC007125.1b (env) | EG462911, EG455888, EG462908 |
IIIb | AL391734 (env) | EG462905, EG462904, EG455886 |
IIIb | AL137079.1 (env) | EG463619, EG463628, EG463610, EG484314, EG484306, EG484300, EG461948, EG461965, EG461956, EG484310, EG463626, EG484303, EG461951, EG484304, EG484316, EG484314, EG484313, EG484299, EG484318, EG463627, EG463617, EG461953, EG459865, EG459891, EG461968, EG461958, EG461955, EG461949, EG463621, EG463625, EG463616, EG461967, EG484315, EG484298, EG459890, EG463611 |
IVc | AB046427.1a (gag) | EG452894, EG452887, EG452883, EG452874, EG452872, EG452892, EG452885, EG452879, EG452900, EG452890, EG452873, EG452871 |
IVc | AB046428.1b (gag) | BE526916 |
IVc | AP002067a (gag) | BP837984, BP837278 |
Va | AL161505.2a (env) | EG458656, EG458650 |
Va | AC004483a (gag) | EG491254, EG491238, EG491236, EG491239, EG491247, EG491249, EG491252, EG491244, EG491246, EG491253, EG491242 |
VI | AB073157a (gag) | EG447146, EG446192, EG448096, EG418344 |
VI | AB073166.1 (env) | EG526158, EG526152 |
VI | AB046428.1b (env) | EG526117, EG526154, EG526119 |
VI | AB046425.1 (env) | EG479658, EG504857, EG479617, EG504777, EG479662, EG479648, EG479652, EG479650, EG479663, EG479611, EG479654, EG479607, EG504604, EG504604, EG479605, EG479657, EG504582, EG479655, EG479604, EG479649, EG479646, EG479644, EG479661, EG504856, EG479643, EG479651, EG479608 |
unassigned | - | EG472931, EG472931, EG459693, EG459691, BP823996, BP822138, BP819107, BP826056, EG491235, EG491241, EG423786, EG491243, EG491248, EG491250, EG491245, EG491237, EG459228, EG459225, EG479658, EG504857, EG479617, EG504777, EG479662, EG479648, EG479652, EG479650, EG479663, EG479611, EG479654, EG479607, EG504604, EG479605, EG479657, EG504582, EG479655, EG479604, EG479649, EG479646, EG479644, EG479661, EG504856, EG479643, EG479651, EG479608, EG459688, EG459694, EG459692, EG459690 |