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Table 2 Splicing and conservation characteristics of the me-ncRNAs

From: MicroRNA-encoding long non-coding RNAs

ncRNA category

PUT

PST

ANEST

CPMH*

CFLS*

ES me-ncRNAs

56%

44%

2.9

81

37

Other ml-ncRNA

71%

29%

3.7

23#

23

  1. ES: Experimentally Supported; PUT: Percentage of Unspliced Transcripts; PST: Percentage of Spliced Transcripts; ANEST: Average Number of Exons of Spliced Transcripts; CPMH: Conservation of Pre-miRNA Hairpins; CFLS: Conservation of Full Length Sequence;
  2. *Conservation was estimated as the average PhastCons score (APCSs), For "Pre-miRNA hairpins in other ml-ncRNAs", conservation is calculated for all PriMir extracted hairpins
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BMC Genomics

ISSN: 1471-2164

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