Table 4 L. major annotated transcripts preferentially expressed in human infected MDMs.
Tag | Occurrence | IP 2-ΔΔCT | AP 2-ΔΔCT | Accession number | Protein name |
|---|---|---|---|---|---|
CATGACAATCTTGT | 1:4 | ND | ND | LmjF01.0490 | Long chain fatty acid CoA ligase, putative |
CATGGCAGTTATCT | 18:36 | ND | ND | LmjF04.0750 | 60S ribosomal protein L10, putative |
CATGGGCGTCGCGC | 32:48 | ND | ND | LmjF08.0670to08.0760 | amastin-like protein |
CATGCCGGTGGGCC | 4:14 | ND | ND | LmjF15.1040 to 15.1160 | tryparedoxin peroxidase |
CATGCCAGCGGGAT | 5:16 | 3.2 ± 0.11 | 9.4 ± 0.46 | LmjF17.1220 | Histone H2B |
CATGGTAATCCAAA | 1:6 | ND | ND | LmjF20.0870 | ATP-dependent RNA helicase, putative |
CATGGTGTAGAGGA | 2:6 | ND | ND | LmjF22.0110 | GMP synthase, & glutamine transferase |
CATGAGCGCCTGAA | 1:5 | ND | ND | LmjF24.1090 | Predicted multipass transmembrane |
CATGACGGTACCGT | 1:5 | ND | ND | LmjF26.0210 | Silent information regulator 2 |
CATGCGCGAACTAG | 1:4 | ND | ND | LmjF26.1700 | Fatty acid desaturase, putative |
CATGCTAACGTTCT | 1:21 | 1.3 ± 0.09 | 0.8 ± 0.16 | LmjF26.1710 | Cytochrome c oxidase subunit V, putative |
CATGCGACTTCGCT | 1:4 | ND | ND | LmjF26.2220 | Ribosomal protein l38, putative |
CATGGCTGTATCTC | 2:21 | ND | ND | LmjF26.2220 | Ribosomal protein l38, putative |
CATGGCTTCCCTCG | 27:44 | ND | ND | LmjF26.2330 | 60S ribosomal protein L35, putative |
CATGGCGCAGTCCC | 1:4 | ND | ND | LmjF26.2400 | Peroxisomal membrane protein 4, putative |
CATGATGGCGCACC | 1:5 | ND | ND | LmjF27.1190to27.1240 | histone H1, putative |
CATGACGTGCTTGC | 1:6 | ND | ND | LmjF27.2320 | Protein phosphatase-like protein |
CATGCGTAGACGAT | 25:64 | 1.6 ± 0.25 | 0.5 ± 0.05 | LmjF28.2205 | Ribosomal protein S29, putative |
CATGCTTGCAGCAG | 1:4 | ND | ND | LmjF29.0630 | BET1-like protein, putative |
CATGACCGCTGCTA | 8:22 | ND | ND | LmjF30.0680 | 40S ribosomal protein S30, putative |
CATGTTGTTGTATA | 1:6 | ND | ND | LmjF31.1960 | Tryparedoxin-like protein |
CATGGATGGTGTCT | 4:13 | 1.7 ± 0.2 | 5 ± 0.45 | LmjF31.2250 | 3,2-trans-enoyl-CoA isomerase |
CATGCGCGAATAGG | 2:6 | ND | ND | LmjF31.2850 | Ribosomal protein l7/l12-like protein |
CATGGCGTAGAGAA | 1:5 | ND | ND | LmjF31.3130 | Methylcrotonoyl-coa carboxylase protein |
CATGCGGAGTCAGG | 1:7 | 3 ± 0.22 | 1.6 ± 0.09 | LmjF33.0260 | RNA binding protein rggm, putative |
CATGGCCGGATAGA | 1:4 | ND | ND | LmjF33.2300 | udp-glc 4'-epimerase, putative |
CATGTCGGCGGTGA | 1:8 | 2.3 ± 0.21 | 2.44 ± 0.16 | LmjF34.3430 | Cleavage & polyadenylation factor |
CATGGCCGCACCGG | 2:9 | ND | ND | LmjF34.365 & 16.0460 | 60S ribosomal protein L21, putative |
CATGCACACAGCGA | 1:4 | ND | ND | LmjF35.1470 | choline/ethanolamine kinase, putative |
CATGTGTGCTCTTA | 2:8 | 0.9 ± 0.08 | 1.5 ± 0.08 | LmjF35.1540 | Reiske iron-sulfur protein precursor |
CATGGGTAAGGATC | 3:10 | ND | ND | LmjF35.3790to35.3800 | 60S ribosomal protein L23, putative |
CATGTCGATACCCG | 1:8 | 1.9 ± 0.08 | 2 ± 0.13 | LmjF35.4930 | Tubulin tyrosine ligase, putative |
CATGTCCAGTGGGA | 2:8 | ND | ND | LmjF35.5100 | 60S ribosomal protein L37 |
CATGTGTACGAGTC | 1:11 | ND | ND | LmjF36.0010&25.2460 | galactosyltransferase 1, 2, 3, 4 & 6 |
CATGTGATCTTCCG | 2:9 | 2.4 ± 0.06 | 2,1 ± 0.13 | LmjF36.0070 | Stress-inducible protein STI1 homolog |
CATGCTGCGGTGTA | 1:4 | ND | ND | LmjF36.1050 | RNA editing complex protein MP61 |
CATGCGCAAGAAGA | 1:4 | ND | ND | LmjF36.1070to36.1100 | ribosomal protein L24, putative |
CATGGGGACGCGTT | 7:20 | 1.3 ± 0.07 | 0.5 ± 0.03 | LmjF36.1250 | 40S ribosomal protein S9, putative |
CATGCCCACCACGC | 17:28 | ND | ND | LmjF36.3390 | Ribosomal protein L29, putative |
CATGCTTGTGTGAC | 12:23 | 1.4 ± 0.19 | 0.9 ± 0.05 | LmjF36.3760 | 60S ribosomal protein L10a, putative |
CATGGTGGTGTATG | 1:4 | ND | ND | LmjF36.3810 | Aminomethyltransferase |
CATGCTGCGGCGGT | 1:6 | 2.6 ± 0.71 | 2.3 ± 0.17 | LmjF36.5880 | Small GTPase, putative |