Table 1 Average (Av.) relative ncRNA expression levels after RNAi depletion of individual protein components of snoRNPs.
| Â | Â | ncRNA class | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Protein depleted | C/D snoRNAs | H/ACA snoRNAs | snRNAs | Sm Y RNAs | sbRNAs | Other ncRNAsa | |||||||
| Â | Â | Av. | P | Av. | P | Av. | P | Av. | P | Av. | P | Av. | P |
C/D box snoRNPs | Snu13 | 0.24 | 1.6 Ă— 10-6 | 0.83 | 2.9 Ă— 10-3 | 0.99 | 1.9 Ă— 10-2 | 0.48 | 4.4 Ă— 10-1 | 5.44 | 6.6 Ă— 10-3 | 0.52 | 4.9 Ă— 10-1 |
| Â | Nop1 | 0.55 | 1.2 Ă— 10-5 | 1.31 | 1.6 Ă— 10-3 | 1.07 | 5.1 Ă— 10-2 | 0.68 | 7.7 Ă— 10-1 | 5.70 | 1.3 Ă— 10-1 | 0.84 | 4.9 Ă— 10-1 |
| Â | Nop58 | 0.33 | 1.4 Ă— 10-6 | 1.03 | 1.2 Ă— 10-4 | 0.76 | 1.5 Ă— 10-2 | 0.38 | 3.5 Ă— 10-1 | 5.39 | 1.3 Ă— 10-1 | 0.53 | 3.9 Ă— 10-2 |
| Â | Nop56 | 0.93 | 3.7 Ă— 10-2 | 0.96 | 8.2 Ă— 10-1 | 1.03 | 2.8 Ă— 10-1 | 0.96 | 8.3 Ă— 10-1 | 1.98 | 4.1 Ă— 10-4 | 0.99 | 8.9 Ă— 10-1 |
| Â | Gar1 | 0.89 | 7.3 Ă— 10-2 | 0.93 | 7.1 Ă— 10-1 | 0.93 | 8.2 Ă— 10-1 | 0.81 | 8.8 Ă— 10-2 | 5.61 | 2.7 Ă— 10-7 | 0.91 | 9.0 Ă— 10-1 |
H/ACA Box snoRNPs | Cbf-5 | 0.92 | 7.8 Ă— 10-2 | 0.68 | 1.2 Ă— 10-5 | 1.01 | 9.3 Ă— 10-3 | 0.76 | 3.6 Ă— 10-1 | 1.28 | 8.4 Ă— 10-3 | 0.90 | 3.8 Ă— 10-1 |
| Â | Nhp2 | 0.88 | 1.4 Ă— 10-2 | 0.41 | 7.4 Ă— 10-9 | 1.09 | 3.0 Ă— 10-3 | 1.07 | 9.6 Ă— 10-2 | 3.54 | 6.3 Ă— 10-3 | 0.80 | 3.7 Ă— 10-1 |
| Â | Nop10 | 0.87 | 3.2 Ă— 10-3 | 0.19 | 1.3 Ă— 10-8 | 0.68 | 6.0 Ă— 10-2 | 0.97 | 1.2 Ă— 10-1 | 3.42 | 5.8 Ă— 10-3 | 0.93 | 5.7 Ă— 10-2 |