Classification | Potato BAC | Tomato BAC | Potato BES | Tomato BES | ||
---|---|---|---|---|---|---|
 | Total | Syntenic | Non-syntenic |  |  |  |
Transposable elements | 12.27% | 8.51% | 13.19% | 10.66% | 13.09% | 15.93% |
Retrotransposons | 9.58% | 7.22% | 11.19% | 8.32% | 11.77% | 14.54% |
   Ty1-copia | 1.92% | 1.15% | 1.79% | 3.48% | 1.82% | 3.75% |
   Ty3-gypsy | 3.34% | 4.09% | 6.33% | 0.99% | 4.60% | 4.61% |
   LINE | 1.09% | 0.46% | 0.72% | 0.77% | 0.80% | 0.44% |
   SINE | 0.54% | 0.30% | 0.46% | 0.47% | 0.27% | 0.12% |
   Unclassified Retrotransposons | 2.70% | 1.22% | 1.90% | 2.61% | 4.29% | 5.64% |
Transposons | 2.69% | 1.29% | 1.99% | 2.35% | 1.32% | 1.39% |
   Ac/Ds | 0.13% | 0.13% | 0.21% | 0.01% | 0.13% | 0.05% |
   CACTA, En/Spm | 0.03% | 0.05% | 0.07% | 0.00% | 0.03% | 0.01% |
   Unclassified Transposons | 2.53% | 1.11% | 1.71% | 2.34% | 1.15% | 1.32% |
Telomere-related | 0.04% | 0.00% | 0.01% | 0.00% | 1.31% | 0.73% |
   Telomere-associated | 0.04% | 0.00% | 0.01% | 0.00% | 0.49% | 0.72% |
   Telomere | 0.00% | 0.00% | 0.00% | 0.00% | 0.82% | 0.01% |
Ribosomal RNA genes | 0.07% | 0.08% | 0.12% | 0.02% | 0.50% | 3.99% |
   45S rDNA | 0.02% | 0.03% | 0.05% | 0.01% | 0.43% | 3.96% |
   5S rDNA | 0.05% | 0.05% | 0.07% | 0.02% | 0.07% | 0.03% |
Unclassified | 13.51% | 12.38% | 19.18% | 11.61% | 19.28% | 25.64% |
Total | 25.90% | 20.97% | 32.50% | 22.30% | 34.18% | 46.29% |