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Table 4 Annotation of the 21 selected Agilent probes using the Random Forest classification approach

From: Genes related to apoptosis predict necrosis of the liver as a phenotype observed in rats exposed to a compendium of hepatotoxicants

Agilent Probe

Gene Acc. #

Gene Name

Description

A_42_P458530

NM_139342

Ripk3

Rattus norvegicus receptor-interacting serine-threonine kinase 3 (Ripk3)

A_42_P487811

AW914054

Sema4g_predicted

Sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G (predicted)

A_42_P507284

NM_013111

Slc7a1

Rattus norvegicus solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 (Slc7a1)

A_42_P517381

NM_133298

Gpnmb

Rattus norvegicus glycoprotein (transmembrane) nmb (Gpnmb)

A_42_P532103

NM_019905

Anxa2

Rattus norvegicus annexin A2 (Anxa2)

A_42_P594863

AI144754

Rnd1

Rho family GTPase 1 (predicted)

A_42_P621642

XM_341964

Lsp1

Rattus norvegicus similar to Lsp1 protein (LOC361680)

A_42_P695401

NM_031530

Ccl2, MCP-1

Rattus norvegicus chemokine (C-C motif) ligand 2 (Ccl2)

A_42_P710382

BF412297

TC466815

Transcribed locus

A_42_P730684

XM_214096

LOC289801

Rattus norvegicus similar to uridine phosphorylase (LOC289801)

A_42_P768467

BQ207775

RGD1305887

Similar to RIKEN cDNA 2310057H16 (predicted)

A_42_P809565

NM_139324

Ehd4

Rattus norvegicus EH-domain containing 4 (Ehd4)

A_43_P10621

AI177116

Vasp_predicted

Vasodilator-stimulated phosphoprotein (predicted)

A_43_P11353

BC083855

Lcp1

Lymphocyte cytosolic protein 1 (predicted)

A_43_P11621

NM_012924

Cd44

Rattus norvegicus CD44 antigen (Cd44)

A_43_P12519

NM_031114

S100a10

Rattus norvegicus S100 calcium binding protein A10 (calpactin) (S100a10), mRNA [NM_031114]

A_43_P12698

NM_031832

Lgals3

Rattus norvegicus lectin, galactose binding, soluble 3 (Lgals3)

A_43_P12940

NM_053812

Bak1

BCL2-antagonist/killer 1

A_43_P13182

NM_133416

Bcl2a1

B-cell leukemia/lymphoma 2 related protein A1

A_43_P14045

AW914054

Sema4g_predicted

Sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G (predicted)

A_43_P15660

BC079312

Cxcl16

similar to chemokine (C-X-C motif) ligand 16