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Table 3 Degree of overlap in Gene Ontology categories over-represented in the lists of genes selected with the "Best-3800" probes criterion.

From: Performance comparison of two microarray platforms to assess differential gene expression in human monocyte and macrophage cells

GO Categories Present in the 3 lists Affy and Illum only Affy and RNG-86 only Illum and RNG-86 only Affy only Illum only RNG-86 only All
Immunity and defense 235 45 21 32 17 39 38 427
Intracellular signaling cascade 137 35 14 23 31 19 34 293
Lipid, fatty acid and steroid metabolism 125 30 21 20 13 21 12 242
Apoptosis 86 18 11 14 15 9 21 174
Carbohydrate metabolism 92 20 11 18 9 17 22 189
Protein metabolism and modification 355 106 47 77 76 86 121 868
Signal transduction 393 97 55 47 72 54 70 788