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Table 1 Genome features of 'Ca. P. mali' strain AT in comparison to 'Ca. P. asteris' strains AY-WB and OY-M1

From: The linear chromosome of the plant-pathogenic mycoplasma 'Candidatus Phytoplasma mali'

Strain

AT

AY-WB

OY-M

Chromosome size (kb)

601,943

706,569

860,631

Chromosome organization

Linear

Circular

Circular

G+C content (%)

21.4

26.9

27.7

Protein coding (%)

78.9

73.7

73.0

Coding sequences2

497 (16)

671

754 (46)

Average ORF size (bp)

955

776

833

Multiple-copy genes3

89

202

250

Genes with assigned function

338 (68%)

349 (52%)

409 (54%)

Conserved hypothetical/predicted novel

72/87

249/73

105/240

Transposases/integrases4

1/1

27/1

12/0

rRNA operons

2

2

2

tRNAs

32

31

32

Extrachomosomal DNAs

0

4

2

  1. 1Chromosome data on strains OY-M an AY-WB from accession number AP006628 and accession number CP000061, respectively.
  2. 2Annotated pseudogenes in brackets. No information on pseudogenes for strain AY-WB.
  3. 3Estimation based on BLAST analysis.
  4. 4Assigned within feature categories note or product.