Table 1 Relative abundance of SSR types by functional genome regions in N. crassa.
From: Simple sequence repeats in Neurospora crassa: distribution, polymorphism and evolutionary inference
| Â | Intergenic region (21.7 Mb) | Genic region (17.4 Mb) | Total (39.2 Mb) | |||||
|---|---|---|---|---|---|---|---|---|
| Â | Â | Â | Exon (14.7 Mb) | Intron (2.7 Mb) | Â | Â | ||
SSR types | Count | RAa | Count | RAa | Count | RAa | Count | RAa |
Mono | 835 | 38.4 | 3 | 0.2 | 152 | 56.3 | 990 | 25.3 |
Di | 167 | 7.7 | 1 | 0.1 | 22 | 8.1 | 191 | 4.9 |
Tri | 414 | 19.1 | 591 | 40.2 | 64 | 23.7 | 1084 | 27.7 |
Tetra | 213 | 9.8 | 1 | 0.1 | 22 | 8.1 | 243 | 6.2 |
Penta | 73 | 3.4 | 1 | 0.1 | 7 | 2.6 | 82 | 2.1 |
Hexa | 84 | 3.9 | 64 | 4.4 | 7 | 2.6 | 159 | 4.1 |