Table 1 Genome-wide feature of the microarray. Comparison of numbers and percentages of genes at the Biological Process Gene Ontology between citrus and Arabidopsis.
From: A genome-wide 20 K citrus microarray for gene expression analysis
Genome-wide feature of the microarray | ||
|---|---|---|
| Â | Citrus (%) | Arabidopsis (%) |
anatomical structure morphogenesis | 569 (2.7) | 478 (1.79) |
amino acid and derivative metabolic process | 663 (3.15) | 583 (2.19) |
signal transduction | 818 (3.89) | 997 (3.74) |
cell cycle | 170 (0.81) | 212 (0.8) |
cell differentiation | 417 (1.98) | 345 (1.3) |
cellular homeostasis | 147 (0.7) | 168 (0.63) |
DNA metabolic process | 281 (1.33) | 474 (1.78) |
transcription | 891 (4.23) | 1919 (7.21) |
protein modification process | 940 (4.46) | 1563 (5.87) |
translation | 594 (2.82) | 1392 (5.23) |
death | 167 (0.79) | 116 (0.44) |
growth | 318 (1.51) | 318 (1.51) |
biosynthetic process | 1942 (9.22) | 2947 (11.07) |
carbohydrate metabolic process | 655 (3.11) | 874 (3.28) |
catabolic process | 671 (3.19) | 643 (2.41) |
electron transport | 462 (2.19) | 681 (2.56) |
lipid metabolic process | 586 (2.78) | 798 (3) |
photosynthesis | 140 (0.66) | 144 (0.54) |
protein metabolic process | 2347 (11.15) | 4137 (15.53) |
secondary metabolic process | 461 (2.19) | 421 (1.58) |
abscission | 11 (0.05) | 5 (0.02) |
embryonic development | 536 (2.55) | 505 (1.9) |
flower development | 255 (1.21) | 213 (0.8) |
ripening | 10 (0.05) | 3 (0.01) |
regulation of gene expression, epigenetic | 95 (0.45) | 150 (0.56) |
reproduction | 905 (4.3) | 846 (3.18) |
response to abiotic stimulus | 1238 (5.88) | 904 (3.39) |
response to biotic stimulus | 683 (3.24) | 527 (1.98) |
response to endogenous stimulus | 985 (4.68) | 1052 (3.95) |
response to external stimulus | 441 (2.09) | 263 (0.99) |
response to stress | 1352 (6.42) | 1094 (4.11) |
transport | 1304 (6.19) | 1959 (7.36) |