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Figure 6 | BMC Genomics

Figure 6

From: Re-annotation of the physical map of Glycine max for polyploid-like regions by BAC end sequence driven whole genome shotgun read assembly

Figure 6

Description of a region of chromosome LG G at SoyGD encompassing the examples shown. The current GMOD representation the build 4 representation of 1.0 Mbp of the 51.5 Mbp LG G in SoyGD. Shown are the chromosome (cursor), DNA markers (top row of features); QTL in the region (second row); coalesced clones comprising the anchored contigs (third row); BAC end sequences (fourth row); geneic BES (fifth row); EST hybridizations to MTP2 (sixth row); MTP4 clones (seventh row); BES derived SSR (eighth row); EST hybridizations to build 4 (ninth row); WGS trace file matches from Megablast (tenth and last row). It is recommended readers visit updated site at SoyGD [4] to see a full detailed color version and a build 5 view. The gaps between contigs will be filled in build 5 by contig merges suggested by BES-SSRs and contig end overlap data.

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