Skip to main content

Table 2 Identification of genes located on the 5' end of scaffold 15*

From: The Hypocrea jecorina (Trichoderma reesei) hypercellulolytic mutant RUT C30 lacks a 85 kb (29 gene-encoding) region of the wild-type genome

ORF Location on scaffold Protein ID Putative function
1 247 – 3990 109199 Rhodanese-like protein
2 4265 – 4550 43418 Hypothetical protein
3 7135–9461 109201 FAD-linked oxidase
4 15618–16994 64959 Peptidase S26, signal peptidase
5 18217–19356 122778 Glycerol dehydrogenase GLD2
6 20262–21664 71817 Multidrug resistance protein
7 21775–22841 62215 carbohydrate esterase (family 4), imidase
8 25282–27143 65191 Maltose permease
9 27655–29638 109206 Heterokaryon incompatibility protein het-6
10 32246–33596 64906 Glucan endo-1,6-β-glucosidase (GH5)
11 35024–36114 49946 Glutathione S-transferase
12 36973–37308 65117 Ankyrin repeat protein
13 39475–41248 4726 Protein of the cytochrome P450 CYP2 family (phenylacetate-2 hydroxylase)
14 41375–43162 109211 Monocarboxylate transporter
15 45898–47405 122780 Rhamnogalacturonase RGX1
16 47630–49314 65142 Aldehyde dehydrogenase
17 49852–51907 64971 Aromatic and unpolar amino acid permease
18 52993–55245 71823 Cys6-transcription factor
19 56788–58016 6567 Aldo-keto reductase
20 59125–60081 65097 Alcohol dehydrogenase
21 60755–61994 79725 Cys6-transcription factor
22 62411–63580 65041 N2, N2-dimethylguanosine tRNA methyl transferase
23 64486–65668 64956 Aldehyde dehydrogenase
24 66149–68189 109219 Hypothetical protein, poorly conserved
25 68498–70244 65036 Cytochrome P450-dependent alkane hydroxylase
26 70809–71776 109221 Unknown protein, poorly conserved
27 71889–74905 25224 Acid trehalase GH65
28 76106–84410 65172 Polyketide synthase class 1, reducing
29 84689–85537 79726 Hypothetical protein, well conserved
30 87457–88602 64996 Nitrilase
31 88689–90473 122783 Cys6 transcription factor
32 94737–95939 65039 Sexual development inhibiting protein LsdA
33 97256–98976 65070 Cys6 transcription factor
34 101185–102595 65190 Nitrilase
  1. * Genes 1–29 are are missing from H. jecorina RUT C30
Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us