Table 1 Occurrence of non-redundant SSRs in a set of 3,357 Solanum melongena sequences.
From: Gene-based microsatellite development for mapping and phylogeny studies in eggplant
SSR motif | Number of repeats | Total | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | >15 | ||
A/T | - | - | - | - | - | - | - | - | 2 | 3 | 2 | 12 | 19 |
C/G | - | - | - | - | - | - | - | - | 1 | - | - | - | 1 |
AC/GT | - | - | - | 1 | 1 | - | - | - | - | - | - | - | 2 |
AG/CT | - | - | - | 3 | 1 | - | - | - | - | - | - | - | 4 |
AT/AT | - | - | - | - | 2 | 2 | - | - | 1 | - | - | - | 5 |
AAC/GTT | - | 1 | - | - | - | - | - | - | - | - | - | - | 1 |
ACG/CTG | - | 2 | 1 | - | - | - | - | - | - | - | - | - | 3 |
AAG/CTT | - | 10 | - | - | - | 1 | - | - | - | - | - | - | 11 |
AAT/ATT | - | 1 | - | - | - | - | - | - | - | - | - | 3 | 4 |
ACC/GGT | - | 2 | - | - | - | - | - | - | - | - | - | - | 2 |
ACT/ATG | - | 3 | - | 1 | - | - | - | - | - | - | - | - | 3 |
AGC/CGT | - | 2 | - | - | 1 | - | - | - | - | - | - | - | 4 |
AGG/CCT | - | 1 | - | - | - | - | - | - | - | - | - | - | 1 |
AGT/ATC | - | 5 | - | 1 | - | - | - | - | - | - | - | - | 6 |
CCG/CGG | - | 1 | - | - | - | - | - | - | - | - | - | - | 1 |
AAAT/ATTT | - | - | 1 | - | - | - | - | - | - | - | - | - | 1 |
AACCAG/CTTGGT | 1 | - | - | - | - | - | - | - | - | - | - | - | 1 |
ACCAGC/CGTGGT | - | - | 1 | - | - | - | - | - | - | - | - | - | 1 |
N | - | - | - | - | - | - | - | - | 3 | 3 | 2 | 12 | 20 |
NN | - | - | - | 4 | 4 | 2 | - | - | 1 | - | - | - | 11 |
NNN | - | 28 | 1 | 2 | 1 | - | - | - | - | - | 3 | 36 | |
NNNN | - | 1 | - | - | - | - | - | - | - | - | - | - | 1 |
NNNNNN | 1 | - | 1 | - | - | - | - | - | - | - | - | - | 2 |
Total | 70 | ||||||||||||