From: Conserved upstream open reading frames in higher plants
Accession | FL- cDNAa | Upstream & In-frame stop codon | Agreement with genome annotationb | Alignment of uORFSCAN identified main proteins with UniProt proteinsc | uORF valid | |||||
---|---|---|---|---|---|---|---|---|---|---|
 |  |  |  | UniProt protein length (AA) | Align length (AA) | Identities (%) | Expect | Annotation | GO classication (Arabidopsis thaliana) |  |
AK106095 | Yes | Yes | Yes | 392 | 392 | 100 | 2.2e-217 | Oxidoreductase | [go:19538] protein metabolism [go:16706] oxidoreductase activity | Yes |
AK103391 | Yes | Yes | Yes | 371 | 371 | 100 | 3.4e-194 | Trehalose-6-phosphate phosphatase | [go:5992] trehalose biosynthesis [go:9507] chloroplast [go:4805] trehalose-phosphatase activity | Yes |
AK100589 | Yes | Yes | Yes | 398 | 398 | 100 | 1.1e-215 | AdoMetDC | [go:6596] polyamine biosynthesis [go:5694] chromosome | Yes |
AK073303 | Yes | Yes | Yes | 257 | 257 | 100 | 1.6e-141 | Acyl-CoA independent ceramide synthase | [go:6672] ceramide metabolism [go:16020] membrane [go:3824] catalytic activity [go:16811] hydrolase activity | Yes |
AK072868 | Yes | Yes | Yes | 443 | 443 | 100 | 3.6e-238 | uncharacterized protein (probable CBL-interacting serine/threonine-protein kinase 15) | [go:6468] protein phosphorylation [go:7165] signal transduction [go:5524] ATP binding [go:4672] protein kinase activity | Yes |
AK072649 | Yes | Yes | Yes | 480 | 488 | 76 | 9.6e-199 | Ribosomal protein S6 Kinase | [go:45946] positive translation [go:6468] protein phosphorylation [go:9507] chloroplast [go:16301] kinase activity | Yes |
AK066145 | No | Yes | Yes | 119 | 119 | 100 | 1.3e-59 | Membrane-anchored ubiquitin-fold protein | [go:6464] protein modification | Yes |
AK064792 | Yes | Yes | 197d | 109 | 108 | 57 | 8.4e-26 | F9L1.29 protein | Not available | Yes |
AK060523 | Yes | Yes | Yes | 166 | 166 | 100 | 1.9e-88 | uncharacterized protein (probable ankyrin-3) | [go:9507] chloroplast [go:5515] protein binding | Yes |