From: Conserved upstream open reading frames in higher plants
Accession | FL- cDNAa | Upstream & In-frame stop codon | Agreement with genome annotationb | Alignment of uORFSCAN identified main proteins with UniProt proteinsc | uORF valid | |||||
---|---|---|---|---|---|---|---|---|---|---|
 |  |  |  | UniProt protein length (AA) | Align length (AA) | Identities (%) | Expect | Annotation | GO classication (Arabidopsis thaliana) |  |
AK101100 | Yes | Yes | Yes | 525 | 525 | 100 | 5.0e-287 | Protein phosphatase 2A | [go:6470] protein dephosphorylation [go:166] nucleotide binding | Yes |
AK066952 | Yes | Yes | Yes | 860 | 694 | 99 | 0 | WW domain containing protein | Not available | Yesd |
AK119592 | Yes | Yes | Yes | 343 | 343 | 100 | 6.8e-187 | Homeodomain leucine zipper protein | [go:6355] regulation of transcription [go:3677] DNA binding | Yes |
AK100589 | Yes | Yes | Yes | 398 | 398 | 100 | 1.1e-215 | S-Adenosylmethionine decarboxylase | [go:6596] polyamine biosynthesis [go:5694] chromosome | Yes |
AK103391 | Yes | Yes | Yes | 371 | 371 | 100 | 3.3e-194 | Trehalose-6-phosphate phosphatase | [go:5992] trehalose biosynthesis [go:9507] chloroplast | Yes |
AK069534 | Yes | Yes | 1066e | 485 | 413 | 61 | 7.6e-117 | Auxilin-like protein | Not available | Yesf |
AK069526 | Yes | Yes | Yes | 483 | 483 | 83 | 5.8e-256 | GAMYB-binding protein | [go:6468] protein phosphorylation [go:5524] ATP binding [go:16301] kinase activity | Yes |
AK072868 | Yes | Yes | Yes | 443 | 443 | 100 | 3.5e-238 | CBL-interacting kinase 15 | [go:6468] protein phosphorylation [go:5524] ATP binding [go:16301] kinase activity | Yes |
AK060523 | No | Yes | Yes | 166 | 166 | 99 | 8.2e-88 | Ankyrin-3 | [go:5515] protein binding | Yes |
AK067412 | Yes | Yes | Yes | 353 | 353 | 72 | 1.2e-136 | Protein kinase ATN1 | [go:6468] protein phosphorylation [go:5524] ATP binding [go:16301] kinase activity | Yes |
AK102277 | Yes | Yes | Yes | 338 | 338 | 99 | 4.9e-179 | Hypothetical protein | Not available | Yes |
AK100332 | Yes | Yes | 4092e | 2192 | 872 | 30 | 5.3e-28 | Helicase | [go:3676] nucleic acid binding [go:6355] regulation of transcription [go:5515] protein binding | Nog |
AK059639 | No | Yes | Yes | 154 | 154 | 100 | 2.6e-77 | 40S ribosomal s15 protein | [go:3735] structural part of ribosome [go:6412] protein biosynthesis | Noh |