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Table 1 EST clones significantly up-regulated in resistant and susceptible rainbow trout strains 24 hours after Myxobolus cerebralis exposure using a Wilcoxon test.

From: Discovery of genes implicated in whirling disease infection and resistance in rainbow trout using genome-wide expression profiling

Strain Gene Accession Fold Change
H Ubiquitin-like protein 1* CB499972 8.98
H Ubiquitin-like protein 1* CA064176 3.80
H Interferon regulating factor 1* CA063565 7.24
H Interferon regulating factor 1* CA058315 3.63
H PPAR-α-interacting complex protein 285* CA056844 7.88
H Similar to interferon-inducible protein Gig2* CA054168 5.82
H Metallothionein B* CB507722 4.36
H Metallothionein B * CB508872 3.08
H Metallothionein B* CA046225 2.72
H Metallothionein B CK990592 2.00
H Metallothionein B* CB510653 3.55
H Interferon regulatory factor 7* CB500977 4.36
H Cyclin-dependent kinase 4 inhibitor B CA044251 3.12
H Cyclin-dependent kinase 4 inhibitor B CB499959 2.66
H Beta-2 microglobulin precursor CN442516 2.51
H Beta-2 microglobulin precursor CB498391 2.23
H Beta-2 microglobulin precursor CB496576 2.12
H Beta-2 microglobulin precursor CB505897 2.04
H Beta-2 microglobulin precursor CA043324 2.02
H Proteasome subunit beta type 8 precursor CB496486 2.39
H Interferon-induced 35 kDa protein homolog CB493302 2.38
H Haptoglobin precursor CA038906 2.20
H VHSV-induced protein CB498971 2.07
H Neighbor of COX-4 CB517140 2.01
H Unknown CA050082 2.71
H Unknown CA062379 2.70
H Unknown CB515535 2.41
TL Ubiquitin-like protein 1* CB499972 7.56
TL Ubiquitin-like protein 1 CA064176 3.47
TL Interferon regulating factor 1* CA063565 4.81
TL Interferon regulating factor 1 CA058315 2.80
TL Interferon regulating factor 1 CA063863 2.55
TL PPAR-alpha-interacting complex protein 285* CA056844 3.31
TL Similar to interferon-inducible protein Gig2 CA054168 3.20
TL Similar to CC chemokine SCYA113 CB503743 2.26
TL Unknown CA062379 2.30
  1. H = Hofer (resistant strain); TL = Trout Lodge (susceptible strain); * = In addition to being significant using the Wilcoxon rank sum, these genes are also significant using the modified t-test employed in SAM. Q-values < 1% were considered significant for both tests.