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Table 1 Drosophila enhancers included in the cis-Decoder analysis

From: Sequence conservation and combinatorial complexity of Drosophila neural precursor cell enhancers

Enhancer

# CSBs

Location*/Size in bp

References

CNS Neuroblast

   

deadpan

32

-1405 to -2772/1367

[15]

hunchback

26

-36 to -1270/1224

[16]

nerfin-1

29

-1529 to -160/1369

A. Kuzin (personal com.)

scratch

48

-10867 to -4796/6069

[15]

worniu

106

-51 to -6940/5989

[17]

snail

26

-244- to -1138/869

[18]

PNS Precursor Cell

   

achaete (DC)

28

-5584 to -7725/2141

[19]

amos (3.5)

56

-2397 to +102/2499

[20]

atonal (F:2.6)

60

-2807 to +175/2982

[21]

bearded

20

-589 to +25/614

[22]

Pray For Elves

27

+2236 to +2711/475

[23]

charlatan

18

+15440 to +17758/2318

[23]

deadpan

18

-4166 to -4677/511

[15]

ETS-domain lacking

15

+998 to +2174/1176

[23]

rhomboid

21

-6669 to -8419/1720

[23]

schizo

20

+31166 to + 32661/1595

[23]

scute

7

-2562 to -3015/453

[24]

scratch

21

-3898 to -2000/1998

[15]

Snail

17

-543 to +40/583

[18]

E(spl) enhancers

   

HLHm3

32

-2176 to +177/2353

[25]

HLH m5

38

-1743 to +21/1767

[25]

HLH m7

20

-770 to -26/744

[25]

E(spl)m8

22

-773 to +188/961

[25]

HLHmβ

20

-1012 to +81/1093

[25]

HLH mγ

25

-49 to -853/814

[25]

HLHmδ

20

-1634 to +25/1659

[25]

E(spl)m2

36

-1659 to +48/1707

[26]

E(spl)m4

24

-157 to -1056/899

[27, 28]

E(spl)m6

26

-880 to +7/887

[26]

E(spl)mγ

26

-1718 to -40/1678

[26]

  1. *Relative to transcription start site