Table 3 Colinearity between the faba bean and M. truncatula genomes
FB LG | No. of markers | No. of non-orthologous markers | No. of unassigned markers | Current Mt genetic coverage (LG: cM, No. colinear markers)1,2 | Current Mt pseudogenome coverage (bp)1 | Current faba bean genetic coverage (cM)2 |
|---|---|---|---|---|---|---|
FB-1 | 30 | 6 | 2 | 8: 0 – 68.2, 11 | 8: 736241 – 32433863 (90%) | 0 – 324.8 (100%) |
FB-2 | 27 | 4 | 2 | 1: 0 – 58.5, 9 7: 58.4 – 60, 3 | 1: 59849 – 26963044 (86%) 7: 25725918 – 26383168 (2%) | 152.6 – 313.1 (51.3%) 157.1 – 210.7 (25.4%) |
FB-3 | 18 | 1 | 3 | 4: 48.1 – 59, 11 | 4: 14544831 – 34128326 (50%) | 0 – 238.5 (100%) |
FB-4 | 13 | 2 | 0 | 5: 0 – 32, 6 2: 12.7 – 37.9, 3 | 5: 594897 – 17960204 (47%) 2: 8491236 – 15201671 (24%) | 0 – 142 (67%) 250.5 – 256.3 (1.9%) |
FB-5 | 12 | 1 | 1 | 3: 28 – 70.3, 9 | 3: 10888141 – 28213807 (46%) | 0 – 140.3 (92%) |
FB6 | 8 | 4 | 0 | 1: 2 – 2.2, NA | 1: 4942324 – 5151182 (0.7%) | - |
FB-7 | 7 | 0 | 0 | 7: 22.6 – 52.8, 4 | 7: 9999559 – 22150020 (38%) | 0 – 58.9 (49%) |
FB-8 | 6 | 1 | 0 | 2: 48 – 57.8, 5 | 2: 17523205 – 20646361 (11%) | 0 – 49.9 (100%) |
FB-9 | 5 | 0 | 0 | 3: 62 – 72.5, 5 | 3: 19000000* – 30712150 (31%) | 0 – 64.1 (100%) |
FB-10 | 3 | 1 | 0 | 4: 0 – 7.4, NA | 4: 537530 – 3489843 (8%) | - |
FB-11 | 3 | 3 | 0 | NA | NA | - |
FB-12 | 3 | 0 | 0 | 4: 60.4 – 61.1, NA | 4: 36664007 – 38186081 (4%) | - |