Genomic Element | Chromosome | plasmid | |
---|---|---|---|
Length (bp) | 3,996,255 | 382,976 | |
GC content (%) | 71.35 | 68.54 | |
Proteins | 3, 534 | 327 | |
Coding region of genome (%) | 88.85% | 81.94% | |
Proteins with known or predicted function | 2,394(67.75%) | 201(61.47%) | |
Conserved hypothetical proteins | 560(15.84%) | 25(7.65%) | |
Hypothetical proteins | 580(16.41%) | 101(30.88%) | |
rRNA operon | 1 | 0 | |
tRNAs | 42 | 0 | |
Proteins in each | [J] Translation, ribosomal structure and biogenesis | 185 (5.24%) | 3 (1.21%) |
COG category | [K] Transcription | 210 (5.94%) | 22 (8.91%) |
[L] Replication, recombination and repair | 139 (3.93%) | 23 (9.31%) | |
[D] Cell cycle control, cell division, chromosome partitioning | 27 (0.76%) | 0 | |
[V] Defense mechanisms | 51 (1.44%) | 3 (1.21%) | |
[T] Signal transduction mechanisms | 166 (4.7%) | 24 (9.72%) | |
[M] Cell wall/membrane/envelope biogenesis | 195 (5.52%) | 15 (6.07%) | |
[N] Cell motility | 62 (1.75%) | 4 (1.62%) | |
[U] Intracellular trafficking, secretion, and vesicular transport | 96 (2.72%) | 13 (5.26%) | |
[O] Posttranslational modification, protein turnover, chaperones | 151 (4.27%) | 32 (12.96%) | |
[C] Energy production and conversion | 188 (5.32%) | 16 (6.48%) | |
[G] Carbohydrate transport and metabolism | 161 (4.56%) | 15 (6.07%) | |
[E] Amino acid transport and metabolism | 293 (8.29%) | 5 (2.02%) | |
[F] Nucleotide transport and metabolism | 58 (1.64%) | 3 (1.21%) | |
[H] Coenzyme transport and metabolism | 116 (3.28%) | 3 (1.21%) | |
[I] Lipid transport and metabolism | 215 (6.09%) | 12 (4.86%) | |
[P] Inorganic ion transport and metabolism | 223 (6.31%) | 24 (9.72%) | |
[Q] Secondary metabolites biosynthesis, transport and catabolism | 152(4.3%) | 9 (3.64%) | |
[R] General function prediction only | 444 (12.57%) | 28 (11.34%) | |
[S] Function unknown | 307 (8.69%) | 20 (8.10%) |