Table 1 STS markers used in the molecular analysis of the K locus.
From: Partial duplication of the PRLR and SPEF2 genes at the late feathering locus in chicken
Marker Name | Location1 (bp) | Position | Sequence | Length (bp) |
|---|---|---|---|---|
STS_0 | 800926192 | Forward | CACACAGAAGACGGTGGATG | 170 |
800927882 | Reverse | TGGCTCCTACCTCCTGACAC | ||
STS_1 | 9764119 | Forward | GAAGGAGAGCCTGTTTGCTG | 207 |
9764325 | Reverse | CTTGTGGTGGTGAAGTGGTG | ||
STS_2 | 9862778 | Forward | AAGTGGGACAACGGAAAGAC | 345 |
9863122 | Reverse | AGGTCAAAGAAGGCACAAGG | ||
STS_3 | 9913200 | Forward | AGCCAGAAACAAAAGCCAAA | 148 |
9913347 | Reverse | TCAGCCTCGACACAGAAAAA | ||
STS_4 | 9933229 | Forward | AGTGTCAGTGTGCCTCTTGG | 170 |
9933398 | Reverse | CACGGCATTTATGAGATTGG | ||
STS_5 | 9950543 | Forward | AATCAGAGTTGCAGGGGTTG | 135 |
9950677 | Reverse | TTGACTGGGGCTCAATAAGG | ||
STS_6 | 9960545 | Forward | TCTCCCTCCCTGTCTTCTCA | 215 |
9960759 | Reverse | TGGCCTTGAAAATCCTCTTG | ||
STS_7 | 9973781 | Forward | TAGCAGACAAGGGCATTCAG | 198 |
9973584 | Reverse | GCATTTGTAGGGCTGGATTTG | ||
STS_8 | 9996871 | Forward | ACCAAAGCGTCCAAAATGTC | 198 |
9997068 | Reverse | TACCAGGGGAGAGCATGAAG | ||
STS_9 | 10038160 | Forward | AAATAGGCACGAGGGAAGC | 176 |
10037985 | Reverse | AACCATCAAGACTGGCTCAAC | ||
STS_10 | 10078039 | Forward | GCCCTCTAAGTGCCTGACTG | 182 |
10078220 | Reverse | TTTCATGCGTAGGAGCTGTG | ||
STS_11 | 10106858 | Forward | CACTTCCAGGGTTGGTGACT | 343 |
10107200 | Reverse | GAGGGCATCCATCACATCTC | ||
STS_12 | 10135701 | Forward | TGGAGCTGAGGAAAGAATCC | 105 |
10135805 | Reverse | TGCTTGCAGGTTTGAGTGTC | ||
STS_13 | 10168014 | Forward | TCCACTTGTCATGCACTTCC | 179 |
10168192 | Reverse | AAGTTCCCCAAAAATACTGCTG | ||
STS_14 | 10181226 | Forward | TGTGAGCAATTCCATTCTGG | 216 |
10181441 | Reverse | TTGGTTCAGTTTGGTCATCG | ||
STS_Junction | 10141819 | Forward | CTGAGAGTGTTGTCCCAGCA | 14323 |
9966922 | Reverse | TGTTGAGTGCTCTTGGTTGC | ||
STS_Control | 9899810 | Forward | ACGCTGGCTTTCCCAACAG | 70 |
9899879 | Reverse | AGACTGCCACATACCAGAAGCA | ||
STS_Break | 10142644 | Forward | ACAAGTGTCAGACTAGGGCTAGCA | 783 |
9966396 | Reverse | TGAAACCATCCCTGGAGAGATG | ||
STS_5block | 9965590 | Forward | ACCATTTCCACATTCCCTTCT | 1333 |
9966922 | Reverse | TGTTGAGTGCTCTTGGTTGC | ||
STS_3block | 10141819 | Forward | CTGAGAGTGTTGTCCCAGCA | 1289 |
10143107 | Reverse | CGGGCCATTATTTCATTTTG |