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Table 3 Oligonucleotide primers used in this study

From: Transcriptome analysis reveals response regulator SO2426-mediated gene expression in Shewanella oneidensis MR-1 under chromate challenge

Primer

DNA sequence (5' → 3')

Reference or source

Construction of Δ so2426 strain

Del840-F

CTTGGTTACCGGCTAGTGAAC

This study

Del840-R

GGCAGGTATTGATAACAATGA

This study

Del900-F

GGTTCACACCAATCGCATTAG

This study

Del900-R

TGGCCAATACCCGCTTACCGC

This study

ISU2426

GCCTAAGATGCCATCAGT

This study

ISD2426

TCTTCAAGATTTAGCTTATCC

This study

OP840

CACATAAGGCAGACCTTCGTC

This study

OP900

ATGGTCCGTACTGTGGCCGC

This study

kanF

ATTGTTGATGCGCTGGCAGT

[32]

kanR

TCCGGTGAGAATGGCAAAAG

[32]

Construction of complementation plasmid

2426com-F

ACACACAAGCTTGCGCTTTTCTTTTAGGTACAA

This study

2426com-R

ACACACGGATCCGACTCACAGAGGGCGCTTA

This study

RT-PCR analysis

P1

ATGATATTGATTCTCGTTTG

This study

P2

CCGAGTGTGGTTAACTGATG

This study

P3

CGCCGAGTATTACTGATATGC

This study

P4

AAGCGCTAAAACTGTATCC

This study

P5

TTAACATGCATCTACTTTTA

This study

P6

GATCTTGCAGGTTGTTGTT

This study

P7

TCATACACTCTTTCGCTTAT

This study

P8

CTGTTTCTTCAACTCAGCCT

This study

P9

CAGTCGTTAGCTCAATTGCT

This study