Catalogue of epidermal genes: Genes expressed in the epidermis during larval molt of the silkworm Bombyx mori

BMC Genomics

Table 3 Preferentially expressed genes in epM data set compared to other Bombyx EST libraries.

Cluster No.	Total ESTs		Gene name	CG No.	E-value*	Score*	OtherLibrary**
Homology with known proteins
21	60		CG32774	CG32774	1E-06	50.8	5 (vg4M)
23	47		CG13731	CG13731	2E-19	94.4	4(vg4M, e100, ceN)
85	10	Ejaculatory bulb protein III		CG11390	1E-20	95.9	2 (epV3, mxg)
91	10	FG10924.1 (Gibberella zeae PH-1)				0
157	6	Osiris 9		CG15592	8E-22	100	1 (wdV3)
197	5	Osiris 9		CG15592	1E-09	60.5	0
205	5	CG10264		CG10264	1E-13	73.6	0
207	5	TpnC25D		CG6514	9E-48	186	0
216	4	fungal protease-specific inhibitor-F (Bombyx mori)
No homologous genes
38	22	no homology					5 (phe, MFB, epV3)
131	7	no homology					0
175	5	no homology					0
199	5	no homology					0

* E-value and score are calculated in Drosophila homologs.
**Abbreviation: ceN (compound eyes, 5th-pupa), e100 (embryo, 100 hr after fertilization), epV3 (epidermis, 5th day 3), MFB (fat body, 5th-instar larva microbe-infected), mxg (maxillary galea, 5th-instar day-3 larva), phe (pheromone gland, newly-eclosed adult), vg4M (Verson's gland, 4th molting stage), wdV3 (wing disc, spinning stage day-3)

ISSN: 1471-2164