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Table 2 SNP panel in sheep MHC class III region

From: A map of the class III region of the sheep major histocompatibilty complex

Locus Name GenBank ID Mutation Position SEQUENCE
APOMS1 EF139192 G/A 1423 TTGGCAGGAC(G/A)GCCAGCTCAT
BAT2S1 EF197828 C/T 1441 AAACAGCAAG(C/T)CCAAGCCCTA
BAT2S2 EF197828 A/G 1101 TCCCTGCTCC(A/G)CCAAGGGCCT
BAT5S1 EF197830 A/G 225 GCTTGGGGAC(A/G)GGGGTACCCT
BFS1 EF446375 C/T 2922 CACTCCATGA(C/T)CTCTCACTCA
BFS2 EF446375 C/T 4222 CCATTCTGAG(C/T)TTCTGCAGTG
C2S1 EF446374 A/G 1468 CACGGTGAGC(A/G)CTGGACTCAG
C2S2 EF446374 G/C 1809 CTAGCAAGCT(G/C)TGCCCTGGGC
C2S3 EF446374 C/T 1394 GGCCTATCTG(C/T)CTCCCCTGCA
C2S4 EF446374 C/T 320 GAGCGGAGGG(C/T)ATCCTGCTCA
G6bS1 EF197833 C/T 1396 AGGAGTTGAG(C/T)GACCTACATT
LTAS1 DU475543.1 A/G 259 CAGGTGGGAG(A/G)GTATATACTG
LTAS2 DU475543.1 C/T 486 CCTTCTCCTC(C/T)GAATTTACTG
LTAS3 DU475543.1 A/G 254 TGTCCCAGGT(A/G)GGAGGGTATA
JQMSH5S1 EF197839 A/T 3781 TATTTTAGAA(A/T)GAAGAATAGT
JQMSH5S2 EF197839 A/G 3844 ATGCAATGCT(A/G)CAGGTTAAAG
JQMSH5S3 EF197839 C/T 2169 GACAAAATTA(C/T)GGAATGTTCC
JQMSH5S4 EF197839 A/G 2832 TTCTGCTCCA(A/G)TTGGTCCATG
JQNG22S1 EF197840 A/G 926 GTACGGTGCC(A/G)GAGCTCCCAG
TNXBS1 EF197845 C/T 1293 CTCTACCTGT(C/T)TCTCAGAACC
TNXBS2 EF197845 A/G 1324 GAAGAAATCG(A/G)AGCAGAGCCT
TNFaS1 EF446377 A/G 2408 GCCTCCTTTT(A/G)CTTATGTTTT
TNFaS2 EF446377 A/G 2149 CTTCCTGCCA(A/G)TGTTTCCAGA
TNFaS3 EF446377 A/G 1590 CTGCCATCAA(A/G)AGCCCTTGCC
TNFaS4 EF446377 A/G 1389 GGGGGGACTC(A/G)TATGCCAATG
TNFaS5 EF446377 C/T 1951 GCCTGGACAA(C/T)GGGCCACCAA
  1. Location and allelic variation of sheep MHC class III SNPs with GenBank accession numbers.