TY - JOUR AU - Said-Salim, B. AU - Dunman, P. M. AU - McAleese, F. M. AU - Macapagal, D. AU - Murphy, E. AU - McNamara, P. J. AU - Arvidson, S. AU - Foster, T. J. AU - Projan, S. J. AU - Kreiswirth, B. N. PY - 2003 DA - 2003// TI - Global regulation of Staphylococcus aureus genes by Rot JO - Journal of bacteriology VL - 185 UR - https://doi.org/10.1128/JB.185.2.610-619.2003 DO - 10.1128/JB.185.2.610-619.2003 ID - Said-Salim2003 ER - TY - JOUR AU - Dancer, S. J. PY - 2004 DA - 2004// TI - How do we assess hospital cleaning? a proposal for microbiological standards for surface hygiene in hospitals JO - Journal of Hospital Infection VL - 56 UR - https://doi.org/10.1016/j.jhin.2003.09.017 DO - 10.1016/j.jhin.2003.09.017 ID - Dancer2004 ER - TY - JOUR AU - Walton, K. AU - Walker, R. AU - Sandt, J. J. v. a. n. d. e. AU - Castell, J. V. AU - Knapp, A. G. AU - Kozianowski, G. AU - Roberfroid, M. AU - Schilter, B. PY - 1999 DA - 1999// TI - The application of in vitro data in the derivation of the acceptable daily intake of food additives JO - Food Chem Toxicol VL - 37 UR - https://doi.org/10.1016/S0278-6915(99)00107-6 DO - 10.1016/S0278-6915(99)00107-6 ID - Walton1999 ER - TY - JOUR AU - Bomhard, E. M. AU - Brendler-Schwaab, S. Y. AU - Freyberger, A. AU - Herbold, B. A. AU - Leser, K. H. AU - Richter, M. PY - 2002 DA - 2002// TI - O-phenylphenol and its sodium and potassium salts: a toxicological assessment JO - Critical reviews in toxicology VL - 32 UR - https://doi.org/10.1080/20024091064318 DO - 10.1080/20024091064318 ID - Bomhard2002 ER - TY - JOUR AU - Johnson, G. D. AU - Harsy, S. G. AU - Geronimo, J. AU - Wise, J. M. PY - 2001 DA - 2001// TI - Orthophenylphenol and phenylhydroquinone residues in citrus fruit and processed citrus products after postharvest fungicidal treatments with sodium orthophenylphenate in California and Florida JO - J Agric Food Chem VL - 49 UR - https://doi.org/10.1021/jf0012087 DO - 10.1021/jf0012087 ID - Johnson2001 ER - TY - JOUR AU - Hiraga, K. AU - Fujii, T. PY - 1984 DA - 1984// TI - Induction of tumours of the urinary bladder in F344 rats by dietary administration of o-phenylphenol JO - Food Chem Toxicol VL - 22 UR - https://doi.org/10.1016/0278-6915(84)90166-2 DO - 10.1016/0278-6915(84)90166-2 ID - Hiraga1984 ER - TY - JOUR AU - Routledge, E. J. AU - Sumpter, J. P. PY - 1997 DA - 1997// TI - Structural features of alkylphenolic chemicals associated with estrogenic activity JO - The Journal of biological chemistry VL - 272 UR - https://doi.org/10.1074/jbc.272.6.3280 DO - 10.1074/jbc.272.6.3280 ID - Routledge1997 ER - TY - JOUR AU - Chang, W. AU - Small, D. A. AU - Toghrol, F. AU - Bentley, W. E. PY - 2005 DA - 2005// TI - Microarray analysis of Pseudomonas aeruginosa reveals induction of pyocin genes in response to hydrogen peroxide JO - BMC Genomics VL - 6 UR - https://doi.org/10.1186/1471-2164-6-115 DO - 10.1186/1471-2164-6-115 ID - Chang2005 ER - TY - JOUR AU - Chang, W. AU - Small, D. A. AU - Toghrol, F. AU - Bentley, W. E. PY - 2005 DA - 2005// TI - Microarray analysis of toxicogenomic effects of peracetic acid on Pseudomonas aeruginosa JO - Environmental science & technology VL - 39 UR - https://doi.org/10.1021/es0503534 DO - 10.1021/es0503534 ID - Chang2005 ER - TY - JOUR AU - Chang, W. AU - Small, D. A. AU - Toghrol, F. AU - Bentley, W. E. PY - 2006 DA - 2006// TI - Global transcriptome analysis of Staphylococcus aureus response to hydrogen reroxide JO - Journal of bacteriology VL - 188 UR - https://doi.org/10.1128/JB.188.4.1648-1659.2006 DO - 10.1128/JB.188.4.1648-1659.2006 ID - Chang2006 ER - TY - JOUR AU - Chang, W. AU - Toghrol, F. AU - Bentley, W. E. PY - 2006 DA - 2006// TI - Toxicogenomic response of Staphylococcus aureus to peracetic acid JO - Environmental science & technology VL - 40 UR - https://doi.org/10.1021/es060354b DO - 10.1021/es060354b ID - Chang2006 ER - TY - JOUR AU - Jang, H. J. AU - Chang, M. W. AU - Toghrol, F. AU - Bentley, W. E. PY - 2008 DA - 2008// TI - Microarray analysis of toxicogenomic effects of triclosan on Staphylococcus aureus JO - Appl Microbiol Biotechnol VL - 78 UR - https://doi.org/10.1007/s00253-008-1349-x DO - 10.1007/s00253-008-1349-x ID - Jang2008 ER - TY - JOUR AU - Small, D. A. AU - Chang, W. AU - Toghrol, F. AU - Bentley, W. E. PY - 2007 DA - 2007// TI - Toxicogenomic analysis of sodium hypochlorite antimicrobial mechanisms in Pseudomonas aeruginosa JO - Appl Microbiol Biotechnol VL - 74 UR - https://doi.org/10.1007/s00253-006-0644-7 DO - 10.1007/s00253-006-0644-7 ID - Small2007 ER - TY - JOUR AU - Small, D. A. AU - Chang, W. AU - Toghrol, F. AU - Bentley, W. E. PY - 2007 DA - 2007// TI - Comparative global transcription analysis of sodium hypochlorite, peracetic acid, and hydrogen peroxide on Pseudomonas aeruginosa JO - Appl Microbiol Biotechnol VL - 76 UR - https://doi.org/10.1007/s00253-007-1072-z DO - 10.1007/s00253-007-1072-z ID - Small2007 ER - TY - JOUR AU - Chang, M. W. AU - Toghrol, F. AU - Bentley, W. E. PY - 2007 DA - 2007// TI - Toxicogenomic response to chlorination includes induction of major virulence genes in Staphylococcus aureus JO - Environmental science & technology VL - 41 UR - https://doi.org/10.1021/es070929k DO - 10.1021/es070929k ID - Chang2007 ER - TY - JOUR AU - Lambert, R. J. PY - 2004 DA - 2004// TI - Comparative analysis of antibiotic and antimicrobial biocide susceptibility data in clinical isolates of methicillin-sensitive Staphylococcus aureus, methicillin-resistant Staphylococcus aureus and Pseudomonas aeruginosa between 1989 and 2000 JO - J Appl Microbiol VL - 97 UR - https://doi.org/10.1111/j.1365-2672.2004.02345.x DO - 10.1111/j.1365-2672.2004.02345.x ID - Lambert2004 ER - TY - BOOK PY - 2004 DA - 2004// TI - Affymetrix GeneChip® expression analysis technical manual PB - Affymetrix, Inc CY - Santa Clara, California ID - ref17 ER - TY - STD TI - NCBI's Gene Expression Omnibus. [http://www.ncbi.nlm.nih.gov/geo] UR - http://www.ncbi.nlm.nih.gov/geo ID - ref18 ER - TY - STD TI - the Gene Classification based on COG functional categories in the genome of National Center for Biotechnology information (NCBI). [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=19213] UR - http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=19213 ID - ref19 ER - TY - JOUR AU - Dubrac, S. AU - Msadek, T. PY - 2004 DA - 2004// TI - Identification of genes controlled by the essential YycG/YycF two-component system of Staphylococcus aureus JO - Journal of bacteriology VL - 186 UR - https://doi.org/10.1128/JB.186.4.1175-1181.2004 DO - 10.1128/JB.186.4.1175-1181.2004 ID - Dubrac2004 ER - TY - JOUR AU - Zhang, H. AU - Switzer, R. L. PY - 2003 DA - 2003// TI - Transcriptional pausing in the Bacillus subtilis pyr operon in vitro: a role in transcriptional attenuation? JO - Journal of bacteriology VL - 185 UR - https://doi.org/10.1128/JB.185.16.4764-4771.2003 DO - 10.1128/JB.185.16.4764-4771.2003 ID - Zhang2003 ER - TY - JOUR AU - Gallagher, M. P. AU - Pearce, S. R. AU - Higgins, C. F. PY - 1989 DA - 1989// TI - Identification and localization of the membrane-associated, ATP-binding subunit of the oligopeptide permease of Salmonella typhimurium JO - European journal of biochemistry/FEBS VL - 180 UR - https://doi.org/10.1111/j.1432-1033.1989.tb14623.x DO - 10.1111/j.1432-1033.1989.tb14623.x ID - Gallagher1989 ER - TY - JOUR AU - Matthysse, A. G. AU - Yarnall, H. A. AU - Young, N. PY - 1996 DA - 1996// TI - Requirement for genes with homology to ABC transport systems for attachment and virulence of Agrobacterium tumefaciens JO - Journal of bacteriology VL - 178 ID - Matthysse1996 ER - TY - JOUR AU - Bugg, T. D. AU - Walsh, C. T. PY - 1992 DA - 1992// TI - Intracellular steps of bacterial cell wall peptidoglycan biosynthesis: enzymology, antibiotics, and antibiotic resistance JO - Natural product reports VL - 9 UR - https://doi.org/10.1039/np9920900199 DO - 10.1039/np9920900199 ID - Bugg1992 ER - TY - JOUR AU - Giesbrecht, P. AU - Kersten, T. AU - Maidhof, H. AU - Wecke, J. PY - 1998 DA - 1998// TI - Staphylococcal cell wall: morphogenesis and fatal variations in the presence of penicillin JO - Microbiol Mol Biol Rev VL - 62 ID - Giesbrecht1998 ER - TY - JOUR AU - Seligman, S. J. PY - 1966 DA - 1966// TI - Penicillinase-negative variants of methicillin-resistant Staphylococcus aureus JO - Nature VL - 209 UR - https://doi.org/10.1038/209994a0 DO - 10.1038/209994a0 ID - Seligman1966 ER - TY - JOUR AU - Izaki, K. AU - Matsuhashi, M. AU - Strominger, J. L. PY - 1968 DA - 1968// TI - Biosynthesis of the peptidoglycan of bacterial cell walls. 8. Peptidoglycan transpeptidase and D-alanine carboxypeptidase: penicillin-sensitive enzymatic reaction in strains of Escherichia coli JO - The Journal of biological chemistry VL - 243 ID - Izaki1968 ER - TY - JOUR AU - Neu, H. C. PY - 1992 DA - 1992// TI - The crisis in antibiotic resistance JO - Science VL - 257 UR - https://doi.org/10.1126/science.257.5073.1064 DO - 10.1126/science.257.5073.1064 ID - Neu1992 ER - TY - JOUR AU - Hoare, D. S. AU - Work, E. PY - 1957 DA - 1957// TI - The stereoisomers of alpha epsilon-diaminopimelic acid. II. Their distribution in the bacterial order Actinomycetales and in certain Eubacteriales JO - The Biochemical journal VL - 65 UR - https://doi.org/10.1042/bj0650441 DO - 10.1042/bj0650441 ID - Hoare1957 ER - TY - JOUR AU - Cox, R. J. PY - 1996 DA - 1996// TI - The DAP pathway to lysine as a target for antimicrobial agents JO - Natural product reports VL - 13 UR - https://doi.org/10.1039/np9961300029 DO - 10.1039/np9961300029 ID - Cox1996 ER - TY - JOUR AU - Scapin, G. AU - Blanchard, J. S. PY - 1998 DA - 1998// TI - Enzymology of bacterial lysine biosynthesis JO - Advances in enzymology and related areas of molecular biology VL - 72 ID - Scapin1998 ER - TY - JOUR AU - Born, T. L. AU - Blanchard, J. S. PY - 1999 DA - 1999// TI - Structure/function studies on enzymes in the diaminopimelate pathway of bacterial cell wall biosynthesis JO - Current opinion in chemical biology VL - 3 UR - https://doi.org/10.1016/S1367-5931(99)00016-2 DO - 10.1016/S1367-5931(99)00016-2 ID - Born1999 ER - TY - JOUR AU - Cox, R. J. AU - Sutherland, A. AU - Vederas, J. C. PY - 2000 DA - 2000// TI - Bacterial diaminopimelate metabolism as a target for antibiotic design JO - Bioorganic & medicinal chemistry VL - 8 UR - https://doi.org/10.1016/S0968-0896(00)00044-4 DO - 10.1016/S0968-0896(00)00044-4 ID - Cox2000 ER - TY - JOUR AU - Hayashi, H. AU - Wada, H. AU - Yoshimura, T. AU - Esaki, N. AU - Soda, K. PY - 1990 DA - 1990// TI - Recent topics in pyridoxal 5'-phosphate enzyme studies JO - Annual review of biochemistry VL - 59 UR - https://doi.org/10.1146/annurev.bi.59.070190.000511 DO - 10.1146/annurev.bi.59.070190.000511 ID - Hayashi1990 ER - TY - JOUR AU - Das, A. AU - Silaghi-Dumitrescu, R. AU - Ljungdahl, L. G. AU - Kurtz, D. M. PY - 2005 DA - 2005// TI - Cytochrome bd oxidase, oxidative stress, and dioxygen tolerance of the strictly anaerobic bacterium Moorella thermoacetica JO - Journal of bacteriology VL - 187 UR - https://doi.org/10.1128/JB.187.6.2020-2029.2005 DO - 10.1128/JB.187.6.2020-2029.2005 ID - Das2005 ER - TY - JOUR AU - Govantes, F. AU - Orjalo, A. V. AU - Gunsalus, R. P. PY - 2000 DA - 2000// TI - Interplay between three global regulatory proteins mediates oxygen regulation of the Escherichia coli cytochrome d oxidase (cydAB) operon JO - Molecular microbiology VL - 38 UR - https://doi.org/10.1046/j.1365-2958.2000.02215.x DO - 10.1046/j.1365-2958.2000.02215.x ID - Govantes2000 ER - TY - JOUR AU - Cook, G. M. AU - Loder, C. AU - Soballe, B. AU - Stafford, G. P. AU - Membrillo-Hernandez, J. AU - Poole, R. K. PY - 1998 DA - 1998// TI - A factor produced by Escherichia coli K-12 inhibits the growth of E. coli mutants defective in the cytochrome bd quinol oxidase complex: enterochelin rediscovered JO - Microbiology VL - 144 UR - https://doi.org/10.1099/00221287-144-12-3297 DO - 10.1099/00221287-144-12-3297 ID - Cook1998 ER - TY - JOUR AU - Mader, U. AU - Hennig, S. AU - Hecker, M. AU - Homuth, G. PY - 2004 DA - 2004// TI - Transcriptional organization and posttranscriptional regulation of the Bacillus subtilis branched-chain amino acid biosynthesis genes JO - Journal of bacteriology VL - 186 UR - https://doi.org/10.1128/JB.186.8.2240-2252.2004 DO - 10.1128/JB.186.8.2240-2252.2004 ID - Mader2004 ER - TY - JOUR AU - O'Riordan, K. AU - Lee, J. C. PY - 2004 DA - 2004// TI - Staphylococcus aureus capsular polysaccharides JO - Clin Microbiol Rev VL - 17 UR - https://doi.org/10.1128/CMR.17.1.218-234.2004 DO - 10.1128/CMR.17.1.218-234.2004 ID - O'Riordan2004 ER - TY - JOUR AU - Mazmanian, S. K. AU - Skaar, E. P. AU - Gaspar, A. H. AU - Humayun, M. AU - Gornicki, P. AU - Jelenska, J. AU - Joachmiak, A. AU - Missiakas, D. M. AU - Schneewind, O. PY - 2003 DA - 2003// TI - Passage of heme-iron across the envelope of Staphylococcus aureus JO - Science VL - 299 UR - https://doi.org/10.1126/science.1081147 DO - 10.1126/science.1081147 ID - Mazmanian2003 ER - TY - JOUR AU - Skaar, E. P. AU - Schneewind, O. PY - 2004 DA - 2004// TI - Iron-regulated surface determinants (Isd) of Staphylococcus aureus: stealing iron from heme JO - Microbes and infection/Institut Pasteur VL - 6 UR - https://doi.org/10.1016/j.micinf.2003.12.008 DO - 10.1016/j.micinf.2003.12.008 ID - Skaar2004 ER - TY - JOUR AU - Bacher, A. AU - Eberhardt, S. AU - Eisenreich, W. AU - Fischer, M. AU - Herz, S. AU - Illarionov, B. AU - Kis, K. AU - Richter, G. PY - 2001 DA - 2001// TI - Biosynthesis of riboflavin JO - Vitam Horm VL - 61 UR - https://doi.org/10.1016/S0083-6729(01)61001-X DO - 10.1016/S0083-6729(01)61001-X ID - Bacher2001 ER - TY - JOUR AU - Vitreschak, A. G. AU - Rodionov, D. A. AU - Mironov, A. A. AU - Gelfand, M. S. PY - 2002 DA - 2002// TI - Regulation of riboflavin biosynthesis and transport genes in bacteria by transcriptional and translational attenuation JO - Nucleic acids research VL - 30 UR - https://doi.org/10.1093/nar/gkf433 DO - 10.1093/nar/gkf433 ID - Vitreschak2002 ER - TY - JOUR AU - Cramton, S. E. AU - Gerke, C. AU - Schnell, N. F. AU - Nichols, W. W. AU - Gotz, F. PY - 1999 DA - 1999// TI - The intercellular adhesion (ica) locus is present in Staphylococcus aureus and is required for biofilm formation JO - Infect Immun VL - 67 ID - Cramton1999 ER - TY - JOUR AU - Rupp, M. E. AU - Ulphani, J. S. AU - Fey, P. D. AU - Bartscht, K. AU - Mack, D. PY - 1999 DA - 1999// TI - Characterization of the importance of polysaccharide intercellular adhesin/hemagglutinin of Staphylococcus epidermidis in the pathogenesis of biomaterial-based infection in a mouse foreign body infection model JO - Infect Immun VL - 67 ID - Rupp1999 ER - TY - JOUR AU - Rupp, M. E. AU - Fey, P. D. AU - Heilmann, C. AU - Gotz, F. PY - 2001 DA - 2001// TI - Characterization of the importance of Staphylococcus epidermidis autolysin and polysaccharide intercellular adhesin in the pathogenesis of intravascular catheter-associated infection in a rat model JO - J Infect Dis VL - 183 UR - https://doi.org/10.1086/319279 DO - 10.1086/319279 ID - Rupp2001 ER - TY - JOUR AU - Rachid, S. AU - Ohlsen, K. AU - Witte, W. AU - Hacker, J. AU - Ziebuhr, W. PY - 2000 DA - 2000// TI - Effect of subinhibitory antibiotic concentrations on polysaccharide intercellular adhesin expression in biofilm-forming Staphylococcus epidermidis JO - Antimicrob Agents Chemother VL - 44 UR - https://doi.org/10.1128/AAC.44.12.3357-3363.2000 DO - 10.1128/AAC.44.12.3357-3363.2000 ID - Rachid2000 ER - TY - JOUR AU - Dukan, S. AU - Levi, Y. AU - Touati, D. PY - 1997 DA - 1997// TI - Recovery of culturability of an HOCl-stressed population of Escherichia coli after incubation in phosphate buffer: resuscitation or regrowth? JO - Appl Environ Microbiol VL - 63 ID - Dukan1997 ER -