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Figure 4 | BMC Genomics

Figure 4

From: WebScipio: An online tool for the determination of gene structures using protein sequences

Figure 4

Gene structures of Myo1A and Myo1F as determined by WebScipio. Columns are the different variants of Myosin 1. Rows are either in-species or cross-species searches. Hs: Homo sapiens, Ppy: Pongo pygmaeus, Caj: Callithrix jacchus, Mm: Mus musculus. Numbers are: top: percentage of protein that could be mapped, middle: percentage of amino acids that could be mapped, buttom: number of contigs the predicted gene structure has been found on. Dark grey bars are introns, red bars are mismatches or frame shifts, light grey bars are introns with correctly determined splice sites, blue bars are introns without correctly determined splice sites, black bars are regions where amino acids could not be mapped onto the genome although there are nucleotides between the matching regions, central lines are amino acids that have no corresponding nucleotides. Thin lines beneath the gene structure depict the contigs on which the nucleotides have been found. For clarity, intron sequences have been scaled down by a factor of 15. Gene structures have been determined using a tile-size of 5. Gene structures with an asterisk (*) have been determined using a tile-size of 7.

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