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Table 1 Comparison of datasets used by Hart et al.[34] for ING protein interaction predictions.

From: Interspecies data mining to predict novel ING-protein interactions in human

 

Reference

Total number of Interact-ions

ING1/YNG1 interactions

ING2/YNG2 interactions

ING3/PHO23 interactions

Interactions matching our predictions

Yeast

Krogan [19]*

393,878

237

772

349

5

 

Krogan [19]

14,317

5

24

15

0

 

Jansen [36]#

49,640

0

0

0

0

 

Ho [68]

8,118

0

0

0

0

 

Gavin [69]

589~

0

0

3

0

 

Ito [70]

4,549

2

1

2

0

 

Uetz [71]

957

0

0

0

0

 

Gavin [72]

491~

2

2

8

0

 

von Mering [32]^

N/A

11

19

17

0

Humans

Rual [73]

6,726

0

0

0

0

 

Stelzl [74]

5,749

0

0

0

0

 

Rhodes [75]

39,816

11

0

0

0

 

Lehner [76]

71,806

3

0

0

0

 

von Mering [32]^

N/A

22

3

18

0

  1. *raw dataset
  2. ~proteins purified
  3. #using LPIT > 300
  4. ^medium confidence experimental reports