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Table 3 Expression profiles of previously characterised cold-regulated genes.

From: Differential SAGE analysis in Arabidopsis uncovers increased transcriptome complexity in response to low temperature

AGI

Gene

Control

30 min

2 hour

2 day

1 week

p-value

At1g09070

SRC2

5

19

31

8

7

1.91E-05

At1g13260

RAV1

1

3

16

4

1

5.63E-05

At1g20440

COR47

7

11

35

62

38

9.09E-12

At1g20450

ERD10

2

15

20

49

23

3.04E-09

At1g20620

Catalase

124

280

71

49

56

1.75E-58

At2g15970

WCOR413-like

32

23

46

99

122

1.38E-20

At2g31360

Δ9 desaturase

1

12

14

5

1

3.30E-03

At2g36530

LOS2

26

14

38

77

103

3.05E-18

At2g42530

COR15b

3

0

11

45

107

5.28E-45

At2g42540

COR15a

2

0

1

19

274

1.22E-185

At3g02480

ABA responsive

1

0

1

0

17

1.91E-10

At3g22840

ELIP

10

0

0

109

318

1.66E-164

At3g30775

ERD5

2

18

3

3

4

1.03E-05

At3g50970

XERO2

1

0

3

13

22

9.59E-09

At3g55120

CHI

2

0

0

19

44

4.56E-21

At4g02380

LEA 3

6

26

11

22

44

6.91E-06

At4g12470

pEARLI 1

30

82

12

77

580

2.61E-244

At4g25470

CBF2

0

4

14

1

0

1.56E-05

At4g25480

CBF3

0

0

59

5

3

1.47E-33

At4g25490

CBF1

0

0

4

0

0

5.58E-03

At4g30650

LTI6A

1

0

2

27

56

1.48E-26

At4g39090

RD19a

3

45

4

4

5

7.00E-19

At5g01490

FAD2

8

22

12

1

5

1.05E-04

At5g13930

CHS

6

4

7

256

84

6.82E-130

At5g15960

KIN1

0

0

0

0

0

na

At5g15970

KIN2

0

0

0

0

0

na

At5g52310

COR78

3

0

0

45

10

4.41E-24

At5g52310

LTI65

3

0

0

34

10

4.41E-24

At5g58070

Lipocallin

2

1

8

20

11

5.23E-05

At5g66400

RAB18

8

0

3

5

39

1.20E-14

  1. For each Arabidopsis gene the observed SAGE tag abundance for each library is shown. The total tags were normalised to 50,000 per library to facilitate comparative expression analysis