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Figure 5 | BMC Genomics

Figure 5

From: Using gene expression databases for classical trait QTL candidate gene discovery in the BXD recombinant inbred genetic reference population: Mouse forebrain weight

Figure 5

eQTL interval mapping of Asb3. eQTL mapping of Asb3 transcript abundance across BXD lines in two independent databases, based on (A) Affymetrix U74Av2 and (B) M430 microarray platforms. In both databases, significant association overlies the location of Asb3, suggesting a potential cis-eQTL. This figure is directly from http://www.genenetwork.org. The blue curve is the LRS trace; the red curve follows the right Y axis (effect size in standard deviations). The red horizontal line indicates genome wide significance. The triangle on the baseline is the position of Asb3. The orange chatter along the X axis indicates the density of SNPs present in the BXD. The multicolored chatter along the top of the graph are hyperlinks to sites with additional genetic and sequence information (when a graph is viewed live at http://www.genenetwork.org).

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BMC Genomics

ISSN: 1471-2164

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