From: Organogenic nodule development in hop (Humulus lupulus L.): Transcript and metabolic responses
GenBank Acc. No. | E value | Annotation | 24 h vs 0 | 15d vs 0 | 28d vs 0 | 28d vs 28dWH | Clone ID/contig |
---|---|---|---|---|---|---|---|
 |  | Defense response, response to stress, response to chemical stimulus, abiotic and biotic stimuli |  |  |  |  |  |
ES437675 | 1,00E-81 | cationic peroxidase [Nelumbo nucifera] | -3.81 | -1.44 | Â | 2.01 | Hlct1 |
ES437719 | 9,00E-119 | peroxidase [Vigna angularis] | 2.73 | 1.53 | 1.79 | 2.03 | Hl4206 |
ES437713 | 2,00E-87 | peroxidase [Populus trichocarpa] | Â | 2.16 | 1.66 | Â | Hl4578 |
ES437767 | 2,00E-13 | SAG21 (Senescence-Associated Gene 21) [Arabidopsis thaliana] | 1.87 | 2.09 | 1.87 | -1.91 | Hl4571 |
ES437753 | 4,00E-77 | Senescence-associated [Medicago truncatula] | 4.06 | 4.32 | 3.46 | Â | Hl1471 |
ES437674 | 0.0 | M. domestica ribulose-1.5-bisphosphate carboxylase/oxygenase activase | -13.29 | -5.38 | -2.97 | Â | Hlct810 |
ES437696 | 1,00E-64 | major allergen Pru p 1 [Prunus persica] | 6.05 | 3.5 | 1.95 | Â | Hl1695 |
ES437747 | 2,00E-48 | major allergen Pru p 1 [Prunus persica] | 5.94 | 3.74 | 2.56 | Â | Hlct313 |
ES437764 | 2,00E-140 | Solanum tuberosum clone 054G03 Hsp90-2-like mRNA | 2.02 | 2.81 | 3.1 | Â | Hlct1560 |
ES437687 | 2,00E-23 | putative gamma-thionin [Castanea sativa] | 5.21 | 1.55 | Â | -1.87 | Hl1925 |
ES437729 | 5,00E-20 | mandelonitrile lyase [Arabidopsis thaliana] | Â | -1.46 | NA | 4.06 | Hl2222 |
ES437733 | 3,00E-152 | Thiazole biosynthetic enzyme, chloroplast precursor | -3.34 | -3.29 | -2.49 | -2.35 | Hl3328 |
ES437789 | 2,00E-162 | Humulus lupulus chitinase | 1.74 | 2.52 | 2.38 | Â | Hlct1044 |
ES437688 | 1,00E-65 | glutathione S-transferase GST 12 [Glycine max] | 4.2 | 2.63 | 2.62 | Â | Hl1525 |
ES437709 | 1,00E-16 | early flowering 3 [Mesembryanthemum crystallinum] | 1.56 | 1.82 | 2.64 | Â | Hl3446 |
ES437740 | 1,00E-12 | nematode responsive protein [Arabidopsis thaliana] | 2.64 | 4.57 | 3.12 | Â | Hl4497 |
EF624245 | 6,00E-124 | putative phenylalanine ammonia-lyase [Rhizophora mangle] | 1.95 | 1.56 | NA | Â | Hlpal |
ES437730 | 3,00E-32 | Populus tremula × Populus tremuloides aux/IAA protein | -1.41 | -1.54 | -2.5 | 2.55 | Hl4491 |
 |  | Macromolecule metabolic processes |  |  |  |  |  |
ES437720 | 6,00E-10 | Solanum tuberosum extensin | 1.97 | 7.03 | 4.44 | Â | Hlct117 |
AY795910 | 0.0 | Humulus lupulus beta-1.3-glucanase | 3.81 | 3.37 | 3.28 | Â | Hlgluc5 |
EF593131 | 2,00E-79 | Pectin methylesterase 1 [Pyrus communis] | Â | 1.65 | Â | Â | Hl52 |
ES437689 | 4,00E-121 | Populus tremula xyloglucan endotransglycosylase/hydrolase precursor XTH-30 | 3.48 | 5.3 | 6.87 | Â | Hl3465 |
ES437757 | 0.0 | Nicotiana tabacum ZIP | -5.77 | -3.4 | NA | NA | Hl4167 |
EF624249 | 5,00E-158 | sucrose synthase [Glycine max] | 3.01 | 1.9 | 1.5 | Â | Hlsuc |
 |  | Cellular metabolic processes |  |  |  |  |  |
ES437727 | 1,00E-56 | RNA binding [Arabidopsis thaliana] | 2.15 | 2.19 | 2.32 | Â | Hl417 |
ES437761 | 4,00E-161 | Avr9/Cf-9 induced kinase 1 [Nicotiana tabacum] | 2.46 | 2.53 | 3.17 | Â | Hl3459 |
ES437769 | 6,00E-20 | Plant lipid transfer protein/Par allergen [Medicago truncatula] | 2.66 | 2.71 | 1.76 | Â | Hl3157 |
ES437798 | 1,00E-156 | Hevea brasiliensis latex plastidic aldolase-like protein | -9.51 | -4.32 | -2.85 | Â | Hlct77 |
ES437772 | 1,00E-94 | ribonuclease/transcriptional repressor [Arabidopsis thaliana] | Â | -1.44 | -2.67 | NA | Hl4319 |
ES437711 | 8,00E-81 | pfkB-type carbohydrate kinase family protein, putative expressed [Oryza sativa] | 3.54 | 2.49 | 2.8 | Â | Hl3980 |
ES437721 | 0.0 | putative dTDP-glucose 4-6-dehydratase [Arabidopsis thaliana] | NA | 2.07 | 2.23 | Â | Hl4620 |
ES437736 | 0.0 | Arabidopsis thaliana mRNA for glyceraldehyde-3-phosphate dehydrogenase C subunit | 2.31 | 2.5 | 1.53 | Â | Hlct23 |
ES437788 | 2,00E-152 | fructose-bisphosphate aldolase-like protein [Solanum tuberosum] | NA | 1.91 | Â | -1.87 | Hlct3973 |
ES437680 | 6,00E-63 | glyceraldehyde-3-phosphate dehydrogenase A subunit, photosynthetic isoform [Glycine max] | -10.78 | -5.17 | Â | Â | Hl263 |
ES437780 | 6,00E-83 | glycerophosphodiesterase-like protein [Nicotiana tabacum] | -1.6 | Â | -1.58 | 2.65 | Hl3510 |
ES437786 | 1,00E-95 | epoxide hydrolase/hydrolase [Arabidopsis thaliana] | Â | Â | NA | 3.18 | Hl1072 |
ES437692 | 0.0 | C. blumei kinetoplast met gene for cobalamine-independent methionine synthase | 3.56 | 2.13 | 1.45 | Â | Hlct4592 |
ES437722 | 4,00E-09 | S-adenosylmethionine decarboxylase [Malus × domestica] | NA | NA | 2.6 | NA | Hl3196 |
ES437681 | 0.0 | Elaeagnus umbellata S-adenosyl-L-methionine synthetase (SAMS2) mRNA | 1.55 | 2.35 | 1.48 | -1.68 | Hlct214 |
ES437707 | 1,00E-80 | Vitis vinifera 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase | 3.25 | 2.31 | NA | Â | Hl1812 |
ES437758 | 3,00E-85 | Capsicum annuum nucleoside diphosphate kinase | 4.72 | 5.1 | 5.03 | Â | Hl1543 |
ES437763 | 3,00E-82 | MAP kinase-like protein [Gossypium hirsutum] | -1.89 | -1.66 | -2.08 | 2.48 | Hl4516 |
ES437718 | 5,00E-58 | Protein kinase; Type I EGF [Medicago truncatula] | -1.46 | -1.62 | -4.38 | 7.51 | Hl4559 |
ES437766 | 5,00E-77 | Putative phosphatase 2A inhibitor [Arabidopsis thaliana] | -1.68 | -1.92 | -1.67 | 2.35 | Hl2273 |
 |  | Primary metabolic process |  |  |  |  |  |
ES437723 | 5,00E-11 | Corylus avellana lipid transfer protein precursor | Â | Â | 1.95 | 1.99 | Hl2898 |
ES437779 | 1,00E-14 | Lipoxygenase [Medicago truncatula] | 3.35 | 2.42 | Â | Â | Hllox6 |
ES437705 | 2,00E-31 | Lipoxygenase [Nicotiana attenuata] | Â | Â | -3.26 | 4 | Hl2195 |
 |  | Transcription and DNA and RNA metabolism |  |  |  |  |  |
ES437679 | 2,00E-32 | ZFP4 (ZINC FINGER PROTEIN 4); nucleic acid binding/transcription factor/zinc ion binding [Arabidopsis thaliana] | 3.83 | 2.99 | 3.35 | Â | Hl1813 |
ES437796 | 1,00E-43 | histone H2B1 [Gossypium hirsutum] | 2.66 | 2.57 | 2.36 | Â | Hl2418 |
ES437677 | 2,00E-62 | A. thaliana histone H4 gene | 3.76 | 1.94 | 1.73 | 2.03 | Hlct2847 |
 |  | Signal transduction |  |  |  |  |  |
ES437693 | 5,00E-70 | Medicago truncatula small G-protein ROP9 | 6.54 | 7.27 | 6.23 | Â | Hl1506 |
ES437706 | 3,00E-118 | Populus tomentosa calmodulin | 1.71 | 2.09 | 1.4 | Â | Hl2815 |
 |  | Cellular component organization and biogenesis |  |  |  |  |  |
ES437700 | 1,00E-39 | Gossypium hirsutum RAC-like G-protein Rac1 | 2.04 | 2.02 | 1.98 | Â | Hl1537 |
ES437797 | 1,00E-113 | Camellia sinensis alpha tubulin 1 (Tua1) | Â | Â | -5.7 | 7.36 | Hl2210 |
ES437690 | 6,00E-12 | Arabidopsis thaliana POK (POKY POLLEN TUBE) | -8.51 | -2.97 | -1.62 | 1.99 | Hl3610 |
 |  | Protein metabolism |  |  |  |  |  |
ES437748 | 8,00E-36 | ribosome inactivating protein Euserratin 2 precursor [Euphorbia serrata] | 1.7 | Â | 1.71 | 2.86 | Hl3627 |
ES437712 | 6,00E-76 | A. thaliana structural constituent of ribosome (AT5G28060) | 2.82 | 2 | 2.3 | Â | Hl1643 |
ES437716 | 5,00E-113 | Cicer arietinum mRNA for ribosomal protein RL5 (rl5 gene) | 3.63 | 5.31 | 5.35 | Â | Hl1520 |
ES437765 | 3,00E-57 | structural constituent of ribosome [Arabidopsis thaliana] | Â | Â | -1.44 | 3.03 | Hl3805 |
ES437756 | 5,00E-41 | Triticum aestivum ribosomal protein L39 | 2.8 | 2.54 | 2.2 | Â | Hl4115 |
ES437773 | 2,00E-55 | 40S RIBOSOMAL PROTEIN S20 homolog [Arabidopsis thaliana] | 2.85 | NA | 2.29 | NA | Hl1619 |
ES437744 | 6,00E-56 | ribosomal protein L30 [Lupinus luteus] | 3.72 | 3.71 | 2.83 | Â | Hlct1532 |
ES437739 | 3,00E-26 | G. hirsutum mRNA for ribosomal protein 41, large subunit (RL41) | 4.22 | 2.17 | 1.57 | Â | Hlct1769 |
ES437701 | 7,00E-15 | putative subtilisin-like serine proteinase [Arabidopsis thaliana] | 1.45 | 1.88 | 2.2 | Â | Hl1547 |
ES437775 | 8,00E-18 | Trifolium pratense RNA for putative zinc dependent protease | NA | NA | 2.63 | NA | Hl1923 |
ES437778 | 3,00E-21 | protein binding/ubiquitin-protein ligase/zinc ion binding [Arabidopsis thaliana] | NA | 1.88 | 2.17 | Â | Hl1495 |
ES437685 | 6,00E-25 | ATP binding/protein binding [Arabidopsis thaliana] | -1.47 | -1.62 | -3.24 | 3.09 | Hl2061 |
 |  | Photosynthesis and carbon utilization |  |  |  |  |  |
ES437710 | 7,00E-165 | oxygen evolving complex 33 kDa photosystem II protein [Nicotiana tabacum] | -10.45 | -4.95 | -2.56 | Â | Hlct484 |
ES437702 | 5,00E-88 | Arachis hypogaea photosystem I psaH protein | -7.75 | -4.86 | -2.28 | Â | Hlct829 |
ES437794 | 2,00E-46 | photosystem I reaction center subunit × psaK [Nicotiana tabacum] | -6.29 | NA | -2.68 | NA | Hlct526 |
ES437741 | 0.0 | Glycine max cv. Dare photosystem II type I chlorophyll a/b-binding protein (lhcb1*7) gene | -9.9 | -6.33 | -2.84 | 1.66 | Hlct54 |
ES437745 | 1,00E-144 | chlorophyll ab binding protein [Gossypium hirsutum], light harvesting complex | -11.69 | -5.89 | -2,43 | 1.86 | Hlct362 |
ES437704 | 1,00E-95 | photosystem II 23 kDa polypeptide [Nicotiana tabacum] | -7.41 | -4.34 | -1.89 | Â | Hl2435 |
ES437703 | 2,00E-131 | chlorophyll a/b binding protein [Solanum tuberosum] | -6.91 | -5.95 | -2.97 | Â | Hlct1969 |
ES437759 | 2,00E-07 | LHCII type I chlorophyll a/b binding protein [Vigna radiata] | -18.13 | -8.33 | -3.71 | 1.78 | Hl240 |
ES437783 | 6,00E-118 | chloroplast pigment-binding protein CP26 [Nicotiana tabacum] | -3.02 | -3.13 | -3.48 | 2.92 | Hl4149 |
ES437793 | 1,00E-86 | PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana] | -4.96 | -4.08 | -2.35 | Â | Hl2281 |
ES437755 | 3,00E-118 | LHCII type III chlorophyll a/b binding protein [Vigna radiata] | NA | -7.85 | -3.04 | Â | Hl3332 |
ES437760 | 5,00E-79 | putative chloroplast chlorophyll a/b-binding protein [Carya cathayensis] | -7.19 | -4.82 | -2.67 | Â | Hl1396 |
ES437673 | 7,00E-85 | small subunit ribulose-1.5-bisphosphate carboxylase/oxygenase [Fagus crenata] | -13.36 | -6.44 | -2.49 | Â | Hlct105 |
ES437715 | 1,00E-128 | chlorophyll a/b-binding protein CP24 precursor [Vigna radiata] | -7.11 | -5.46 | -2.79 | Â | Hlct1168 |
ES437762 | 1,00E-130 | chlorophyll a/b-binding protein [Solanum lycopersicum] | -9.86 | -6.57 | -2.75 | Â | Hlct2446 |
ES437697 | 1,00E-74 | Potato mRNA for light inducible tissue-specific ST-LS1 gene | -11.42 | -4.33 | -2.33 | Â | Hlct30 |
ES437781 | 4,00E-07 | putative photosystem I reaction centre PSI-D subunit precursor [Solanum tuberosum] | -1.78 | -1.85 | -1.74 | 3.03 | Hl3804 |
ES437771 | 7,00E-68 | subunit of photosystem I [Cucumis sativus] | -4.84 | -4.02 | -2.08 | Â | Hlct2254 |
 |  | Generation of precursor metabolites and energy |  |  |  |  |  |
ES437678 | 7,00E-24 | putative photosystem I reaction center subunit IV [Arabidopsis thaliana] | -4.51 | -3.63 | -1.85 | Â | Hl4247 |
ES437751 | 8,00E-87 | Pachysandra terminalis glycolate oxidase | -7.94 | -3.22 | -2.46 | Â | Hl1696 |
ES437768 | 2,00E-39 | putative steroid binding protein [Arabidopsis thaliana] | -1.9 | Â | Â | -1.87 | Hl1863 |
ES437752 | 3,00E-62 | F1-ATP synthase delta subunit [Ipomoea batatas] | NA | 2.35 | 2.87 | Â | Hl1512 |
ES437695 | 2,00E-138 | Gossypium hirsutum vacuolar H+-ATPase subunit B | 2.52 | 2.82 | 2.8 | Â | Hl3429 |
ES437683 | 8,00E-94 | vacuolar-type H+-ATPase (v-ATPase) subunit D [Arabidopsis thaliana] | 1.61 | 1.85 | 2.33 | Â | Hl3612 |
 |  | Secondary metabolic process |  |  |  |  |  |
ES437792 | 7,00E-72 | NADPH-protochlorophyllide oxidoreductase [Cucumis sativus] | -4.21 | -3.95 | -2.26 | Â | Hlct395 |
ES437754 | 2,00E-173 | Malus × domestica cinnamic acid hydroxylase (C4H1) | 2.03 | 2.24 | 1.67 |  | Hlct225 |
ES437670 | 7,00E-93 | iron ion binding/isopenicillin-N synthase/flavonol synthase [Arabidopsis thaliana] | 2.44 | 5.27 | 2.33 | Â | Hl3668 |
 |  | Other classes |  |  |  |  |  |
ES437676 | 1,00E-55 | protein transporter [Arabidopsis thaliana] | -1.47 | -1.84 | -2.25 | 4.29 | Hl1064 |
ES437750 | 3,00E-22 | Gossypium hirsutum hybrid proline-rich protein 2 | Â | 2.43 | Â | Â | Hlct2443 |
ES437749 | 1,00E-08 | metallothionein 1a [Populus balsamifera subsp. trichocarpa × Populus deltoides] | 1.74 | 2.61 | 2.13 |  | Hlct1310 |
ES437717 | 7,00E-54 | Fagus sylvatica glycine-rich protein 2 | 2.55 | 2.08 | Â | NA | Hl1692 |
 |  | Unknown function |  |  |  |  |  |
ES437698 | 3,00E-16 | nectarin IV [Nicotiana langsdorffii × Nicotiana sanderae], xyloglucan-specific fungal endoglucanase-inhibitor |  | -1.46 | -1.79 | 2.69 | Hl3829 |
ES437708 | 2,00E-67 | Stress protein DDR48, related [Medicago truncatula] | 1.65 | 2.22 | 2.9 | Â | Hl3456 |
ES437737 | 6,00E-78 | hypothetical protein OsJ_005893 [Oryza sativa], sodium/calcium exchanger protein | 2.11 | 3.17 | 3.52 | Â | Hlct2641 |
ES437724 | 2,00E-25 | putative type-1 pathogenesis-related protein [Oryza sativa] | 2.16 | 2.43 | 3.51 | Â | Hl697 |
ES437672 | 5,00E-08 | Kunitz inhibitor ST1-like [Medicago truncatula] | 5.39 | 2.28 | 2.95 | Â | Hl2037 |
ES437684 | 2,00E-65 | thioredoxin-dependent peroxidase [Nelumbo nucifera] | 1.62 | 2.23 | 1.44 | Â | Hl3152 |
ES437732 | 1,00E-28 | cystatin-like protein [Citrus × paradisi] | 1.63 | 1.91 | NA | -1.6 | Hl285 |
ES437734 | 1,00E-11 | metal ion binding [Arabidopsis thaliana] | -1.5 | Â | -1.77 | 3.84 | Hl3490 |
ES437777 | 4,00E-93 | Platanus × acerifolia putative zinc-binding protein | 1.88 | 2.11 | 2.24 |  | Hl481 |
ES437738 | 1,00E-24 | hypothetical protein OsI_022889 [Oryza sativa], AN1-like Zinc finger | Â | 1.98 | 2.27 | Â | Hlct1522 |
ES437774 | 7,00E-28 | S locus F-box protein with the low allelic sequence polymorphism 2-Sf [Prunus mume] | Â | -7.04 | -5.52 | 5.47 | Hl4049 |
ES437770 | 3,00E-98 | acireductone dioxygenase-like protein [Brassica juncea] | 1.56 | 2.23 | 1.93 | Â | Hl3444 |
ES437691 | 2,00E-31 | auxin-repressed protein-like protein ARP1 [Manihot esculenta] | -10.78 | -1.93 | -1.49 | 2.23 | Hlct188 |
ES437694 | 2,00E-25 | putative auxin-repressed protein [Prunus armeniaca] | -6.17 | -4.13 | -2.35 | 2.08 | Hl1264 |
ES437742 | 1,00E-65 | Mannose/glucose-specific lectin | NA | 2.25 | 1.81 | -2.96 | Hl1960 |
ES437746 | 2,00E-08 | pore-forming toxin-like protein Hfr-2 [Triticum aestivum] | -5.82 | -4.68 | -3.22 | Â | Hlct272 |
ES437782 | 4,00E-22 | carbohydrate binding [Arabidopsis thaliana] | -6.94 | -3.46 | -1.57 | Â | Hl2175 |
ES437726 | 1,00E-15 | Triticum aestivum acidic ribosomal protein | Â | Â | -2.07 | 2.3 | Hl3792 |
ES437790 | 8E-17 | Similar to threonine endopeptidase [Arabidopsis thaliana] | 5.27 | 7.32 | 5.53 | 2.51 | Hl3859 |
ES437784 | 7,00E-28 | unknown protein [Arabidopsis thaliana] | 1.8 | 2.16 | 2.87 | Â | Hl3471 |
ES437776 | 4,00E-50 | unknown protein [Arabidopsis thaliana] | -2.28 | -2.1 | -2.32 | 2.08 | Hl2053 |
ES437787 | 4,00E-51 | unknown protein [Arabidopsis thaliana] | 1.58 | -3.72 | -2.41 | 2.82 | Hl3322 |
 |  | No identity |  |  |  |  |  |
ES437699 | Â | Â | Â | 3.19 | 2.99 | 1.83 | Hl3362 |
ES437682 | Â | Â | 12.98 | 22.04 | 9.41 | Â | Hlct85 |
ES437795 | Â | Â | Â | Â | -1.65 | -3.23 | Hlct367 |
ES437791 | Â | Â | -1.45 | -1.6 | -1.84 | 2.45 | Hl3793 |
ES437785 | Â | Â | Â | -2.52 | -2.27 | 2.02 | Hl2561 |
ES437735 | Â | Â | -1.65 | Â | Â | 2.01 | Hl1860 |
ES437731 | Â | Â | 7.52 | 11.15 | 5 | Â | Hlct397 |
ES437686 | Â | Â | 5.78 | 12.48 | 7.98 | 2.59 | Hlct182 |
ES437728 | Â | Â | Â | Â | 2.19 | Â | Hl3941 |
ES437725 | Â | Â | 1.76 | 1.81 | 2.15 | Â | Hl1453 |
ES437714 | Â | Â | -2.05 | -2.15 | -2.15 | 2.94 | Hl2078 |
ES437671 | Â | Â | -2.61 | -2.13 | -2.46 | Â | Hl393 |
ES437743 | Â | Â | 1.58 | 1.96 | 1.84 | Â | Hl109 |