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Table 1 Total number and percentage of Affymetrix IDs differentially regulated between any two compartments within one species (increase plus decrease calls)

From: Cross-species comparison of biological themes and underlying genes on a global gene expression scale in a mouse model of colorectal liver metastasis and in clinical specimens

 

Human

Murine

Compartmental Comparisons

%

no

%

no

T/TI

9.1 ± 0.1

1519 ± 9

22.5 ± 0.9

3452 ± 144

L/LI

23.8 ± 5.0

3785 ± 797

25.6 ± 3.5

3790 ± 519

TI/LI

28.8 ± 4.4

5310 ± 819

35.1 ± 4.2

5683 ± 675

LI/T

34.4 ± 4.8

5871 ± 80

28.6 ± 2.4

4327 ± 363

L/TI

37.8 ± 0.1

6817 ± 13

34.9 ± 0.9

5458 ± 138

L/T

40.8 ± 0.8

6555 ± 127

35.0 ± 0.9

5034 ± 124

  1. 100% is equivalent to all IDs present in at least one of the compartments to be compared.
  2. L = liver, LI = liver invasion, TI = tumor invasion, T = tumor. Experiments in duplicates.