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Table 1 Genes captured by maize helitrons

From: A comparative computational analysis of nonautonomous Helitron elements between maize and rice

Gene

No.*

19 kDa zein protein

5

transcriptional activator gene

3

heme oxygenase 1

3

ornithine carbamoyl transferase

1

rust resistance protein rp3-1

2

HC toxin reductase (hm1)

2

alcohol dehydrogenase 1 (adh1)

5

cell division like 1

3

carboxypeptidase

1

VADER mutant shrunken-2 (sh2) pseudogene

4

glyceraldehyde-3-phosphate dehydrogenase

8

phytoene synthase (Y1)

6

high sulfur zein

5

GapC2

7

male sterility restorer factor 2 (rf2a)

7

NOI protein

7

mop1

7

Rap2.7

9

22 kDa alpha zein

13

pullulanase-type starch debranching enzyme

1

Maize oleosin KD18

7

putative ribosomal protein S22 h.

1

protein phosphotase 2C PP2C

1

glucosyl transferase ribosomal protein

1

epsilon protein kinase

2

P450 monooxygenase CYP71C3v2 gene

1

tga1

1

SU1 isoamylase (sugary1)

1

Zm38

1

aberrant pollen transmission 1 (apt1)

1

cytochrome b/f complex

1

rp S8 mRNA

3

aminoadipic semialdehyde synthase

1

transcription initiation factor tfiid

2

protease S28 pro-X carboxypeptidase

1

proteasome regulatory subunits

1

ribophorin

1

ethylene-responsive factor-like protein 1 (ERF1)

1

fertilization-independent endosperm protein 1

1

lysine ketoglutarate reductase/saccharopine dehydrogenase

1

mus1

1

S1 protein (S1)

1

helix-loop-helix type transcription factor R

1

Pl-Bh (Blotched1)

1

anthocyanin regulatory C1 (c1)

1

  1. * Number of helitrons containing a fragment from that gene.