Table 1 Downregulated genes in the ATRX-null forebrain at E13.5 and P0.5.
Chromosome | |||||
|---|---|---|---|---|---|
Gene | Description | Mouse | Human | Fold Change | Genbank |
E13.5 Downregulated Genes | |||||
IMAGE:354942 | Similar to dehydrogenase/reductase (SDR family) X chromosome ( Dhrsxy ) 1 | 4 | X/Y PAR | -4.81 | W45978 |
Csf2ra | Colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) | 19 | X/Y PAR | -3.05 | BM941868 |
Vit | Vitrin | 17 | 2 | -2.74 | AF454755 |
Shox2 | Short stature homeobox 2 | 3 | X/Y PAR | -2.73 | AV332957 |
Tcf7l2 | Transcription factor 7-like 2, T-cell specific, HMG-box | 19 | 10 | -2.72 | BB175494 |
Gbx2 | Gastrulation brain homeobox 2 | 1 | 2 | -2.55 | L39770 |
IMAGE:3326212 | Similar to Arylsulfatase E ( Arse ) 1 | - | X/Y | -2.21 | BE457721 |
Syt13 | Synaptotagmin 13 | 2 | 11 | -2.19 | BB244585 |
Cd99 | CD99 antigen | 4 | X/Y PAR | -2.09 | AK004342 |
Nxph1 | Neurexophilin 1 | 6 | 7 | -1.92 | BB274960 |
Neurod4 | Neurogenic differentiation 4 | 10 | 12 | -1.86 | NM_007501 |
Nxph2 | Neurexophilin 2 | 2 | 2 | -1.86 | BB169128 |
Peg10 | Paternally expressed 10 | 6 | 7 | -1.86 | BG076799 |
RIKEN:1810009N02 | Similar to Asmtl (acetylserotonin O-methyltransferase-like) 1 | - | X/Y PAR | -1.81 | AK007409 |
Wif1 | Wnt inhibitory factor 1 | 10 | 12 | -1.81 | BC004048 |
P0.5 Downregulated Genes | |||||
Csf2ra | Colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) | 19 | X/Y PAR | -7.14 | BM941868 |
Nr4a2 | Nuclear receptor subfamily 4, group A, member 2 | 2 | 2 | -3.33 | NM_013613 |
IMAGE:354942 | Similar to Dhrsxy (dehydrogenase/reductase (SDR family) X chromosome 1 | 4 | X/Y PAR | -3.33 | W45978 |
IMAGE:5656844 | Unknown EST | - | - | -2.86 | BI320076 |
Met | Met proto-oncogene | 6 | 7 | -2.78 | BG060788 |
Cd99 | CD99 antigen | 4 | X/Y PAR | -2.22 | AK004342 |
Dsc3 | Desmocollin 3 | 18 | 18 | -2.22 | NM_007882 |
Mbp | Myelin basic protein | 18 | 18 | -2.17 | AI323506 |
Cbln4 | Cerebellin 4 precursor protein | 2 | 20 | -2.08 | AV343573 |
EST | Unknown EST | - | - | -2.08 | BI202412 |
Trpc4 | Tansient receptor potential cation channel, subfamily C, member 4 | 3 | 13 | -2.04 | BB271442 |
RIKEN:1810009N02 | Similar to Asmtl (acetylserotonin O-methyltransferase-like) 1 | - | X/Y PAR | -2.00 | AK007409 |