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Table 1 Features of Crassostrea hongkongensis mitochondrial genome

From: Complete mitochondrial DNA sequence of oyster Crassostrea hongkongensis-a case of "Tandem duplication-random loss" for genome rearrangement in Crassostrea?

Feature

Sequence location

Size

Start codon

Stop codon

Intergenic region§

cox1

1–1620

1620

ATA

TAA

143

rrnL

1764–2475

712

  

96

cox3

2572–3441

870

ATA

TAA

0

trnI

3442–3508

67

  

0

trnT

3509–3576

68

  

21

trnE

3598–3665

68

  

7

cob

3673–4878

1206

ATA

TAA

8

trnD

4987–5055

69

  

1

cox2

5057–5758

702

ATG

TAG

21

trnM1

5780–5845

66

  

0

trnS1

5846–5917

72

  

16

trnL2

5934–6000

67

  

67

trnM2

6068–6132

65

  

7

trnS2

6140–6207

68

  

178

trnP

6386–6454

69

  

103

rrnS

6558–7505

948

  

49

trnY

7555–7620

66

  

5

atp6

7626–8309

684

ATG

TAG

152

Sup

8462–8527

66

  

294

trnG

8822–8891

70

  

0

MNR

8892–9499

608

  

0

trnV

9500–9572

73

  

42

nad2

9615–10613

999

ATG

TAG

34

trnR

10648–10714

67

  

60

trnH

10775–10839

65

  

-1

nad4

10839–12191

1353

ATA

TAG

7

trnK

12199–12273

75

  

1

nad5

12275–13945

1671

ATG

TAA

14

nad6

13960–14433

474

ATG

TAA

32

trnQ

14466–14534

69

  

5

nad3

14540–14890

351

ATG

TAG

35

trnL1

14926–14991

66

  

35

trnF

15027–15094

68

  

20

trnA

15115–15181

67

  

5

nad1

15187–16122

936

ATG

TAA

3

nad4L

16126–16405

280

ATG

T

0

trnW

16406–16474

69

  

1

  1. § Intergenic region refer to noncoding bases between the feature on the same line and the feature on the line underneath, with a negative number indicating an overlap.