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Figure 6 | BMC Genomics

Figure 6

From: Relationship between mRNA secondary structure and sequence variability in Chloroplast genes: possible life history implications

Figure 6

Chloroplast phylogeny of seventeen plant species. Phylogeny was calculated by using nucleotide sequence alignments of 35 genes from dataset IV. The branch lengths indicate the relative number of substitutions per site. Non-embryophytic land plants (Mesostigma viride, Chaetosphaeridium globosum, Nephroselmis olivacea, Chlamydomonas reinhardtii, and Chlorella vulgaris) were defined as out groups and phylogeny was rooted using them. Bootstrap values indicating branch support are marked next to the branches. Bootstrapping was done by generating 100 replicates of the dataset using "seqboot" program in PHYLIP v.3.67. Phylogenies were generated from these replicates again using the "dnaml" criterion and then drawing a consensus using "consense" option.

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