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Table 1 Genes detected exclusively in roots of the tolerant genotype (Prata Ligeiro) SSH library

From: Identification of drought-responsive genes in roots of upland rice (Oryza sativa L)

Encoded protein Homologous organism Accession number
Proteins of known function   
Glutamate-1-semialdehyde 2,1 aminomutase Oryza sativa NM_001068872
Metallothionein-like protein Oryza sativa NM_001056317
Malate dehydrogenase Oryza sativa NM_001062924
Methionine sulfoxide reductase A Oryza sativa NM_001063272.1
Phosphatidylinosytol 3 and 4 kinase Oryza sativa NM_001060732
Ubiquitin-conjugating enzyme Oryza sativa NM_001048429
Nuclear protein SET domain containing protein Oryza sativa NM_001067672
Splicing factor 3B subunit 5-like protein Oryza sativa dbj|BAD10044.1|
PEP carboxikinase Oryza sativa gb|ABF95034.1|
Putative malate dehydrogenase Oryza sativa gb|AAT69584.1|
Eukaryotic translation initiation factor 5A-2 (eIF-5A) (eIF-4D) Oryza sativa NC_008405
Metallothionein-like protein type 1 Oryza sativa NP_001068544.1
ADP glucose pyrophosphorylase Oryza sativa EF122437
CBL-interacting protein kinase 1 Oryza sativa NM_001049327
ADP-ribosylation factor Oryza sativa NM_001051134
DSS1/SEM1 family protein Oryza sativa NC_008394
Ankyrin repeat containing protein Oryza sativa NM_001054582
Pathogenesis-related transcriptional factor and ERF domain containing protein Oryza sativa NC_008402
E-class P450, group I family protein Oryza sativa NM_001074239
FAR1 domain containing protein Oryza sativa NM_001057341
Tubulin alpha-1 chain Oryza sativa NM_001074145
Putative ubiquitin conjugating enzyme Oryza sativa dbj|BAB89662.1|
DEAD/DEAH box helicase domain containing protein Oryza sativa NM_001069156
Putative pollen specific protein C13 precursor Oryza sativa gb|AAM08621.1|
IQ calmodulin-binding Oryza sativa NM_001061046
HAD superfamily hydrolase 5' nucleotidase protein Oryza sativa NM_001057956
SAM biding motif domain containing protein Oryza sativa NM_001070787
Peptidase aspartic family protein Oryza sativa NM_001063168
Nonaspanin (TM9SF) family protein Oryza sativa NM_001056027
Ethylene responsive element binding factor 5 Oryza sativa NM_001063579
TMS membrane protein Oryza sativa NM_001054899
Heat shock protein DnaJ family protein Oryza sativa NM_001060020
Ferredoxin III, chloroplast precursor (Fd III) Oryza sativa NC_008396
Anther ethylene-upregulated protein ER1 (Fragment) Oryza sativa NM_001055765
Chaperone protein DNA-J-related like Oryza sativa dbj|BAD27799.1|
Isoflavone reductase family protein Oryza sativa NM_001068997
U box domain containing protein Oryza sativa NM_001071339
Ribossomal protein L Curculio glandium AM049038
Short chain dehydrogenase tic32 Oryza sativa NM_001048577
Arabinogalactan protein Oryza sativa NC_008394
Ribonuclease T2 family protein Oryza sativa NM_001070328
HvB12D protein (B12Dg1 protein) Oryza sativa NM_001063815
Respiratory burst oxidase homolog Oryza sativa NM_001049555
Phosphatidylinositol-4-phosphate 5-kinase family protein Oryza sativa NM_001068386
Nodulin-like Oryza sativa NM_001070322
Cathepsin B-like cysteine protease form 2 Ixodes ricinus gb|ABO26563.1|
Cathepsin L-like cysteine proteinase precursor Acanthoscelides obtectus gb|AAQ22984.1|
Calcium-transporting ATPase/calmodulin binding Arabidopsis thaliana NP_188931.1
Myb, DNA biding domain containing protein Oryza sativa NM_001062445
TGA-type basic leucine zipper protein Phaseolus vulgaris gb|AF402607.1|
Tocopherol O-methyltransferase, choroplast precursor Oryza sativa NM_001054379
ATP-dependent Clp protease ATPbiding subunit Clpx-like mitochondrial precursor Oryza sativa dbj|BAD15818.1|
HvB12D protein (B12Dg1 protein) Oryza sativa NM_001063815
Uncharacterized protein family containing protein Oryza sativa gb|ABA91393.1|
Protein of unknown function   
Protein of unknown function Oryza sativa NC_008397
Protein of unknown function Oryza sativa NC_008403
Unknow function Oryza sativa NM_001067277
Hypothetical protein Oryza sativa AP008208
Hypothetical protein Oryza sativa gb|EAY93896.1|
Conserved hypothetical protein Oryza sativa NM_001065538
Hypothetical protein Oryza sativa gb|EAY84091.1|
Hypothetical protein Oryza sativa CT836006
Hypothetical protein Oryza sativa NC_008394.1
Hypothetical protein Oryza sativa NC_008394.1
Hypothetical protein Oryza sativa AP008208
Hypothetical protein Oryza sativa NM_001057688
Hypothetical protein Oryza sativa NM_001066910
Hypothetical protein Oryza sativa NM_001053573
Hypothetical protein Oryza sativa CT829595
Hypothetical protein Oryza sativa CT834076