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Table 2 Genes detected exclusively in roots of the susceptible genotype (IRAT20) SSH library

From: Identification of drought-responsive genes in roots of upland rice (Oryza sativa L)

Encoded protein Homologous organism Accession number
Proteins of known function   
T complex 11 family protein Oryza sativa NM_001059402
Protein kinase domain containing protein Oryza sativa NM_001071926
Protein disulphide isomerase family protein Oryza sativa AP008208
TPR-like domain containing protein Oryza sativa NM_001058028
Protein kinase Oryza sativa NM_001074788
Pinoresinol-lariciresinol reductase TH1 Oryza sativa NM_001073059
Smr protein; MutS2 c- terminal domain containing protein Oryza sativa NM_001048992
SIPL protein (Membrane-type 1 matrix metalloproteinase cytoplasmic tail binding protein-1) Oryza sativa NM_001055581
Similar to CG 9092- PA Tribolium castanum XP_967647.1
Putative ATP-dependent Clp protease ATP-binding subunit ClpX1 (CLPX) Oryza sativa dbj|BAD15818.1|
Cytocrome P450 family protein Oryza sativa NM_001071591
Preprotein translocase subunit sec Y, chloroplast precursor Oryza sativa NM_001067916
Vacuolar H+ pyrophosphatase Oryza sativa NM_001063501
Similar to UPF 0139 protein CGI-140 Tribolium castaneum XP_971064.1|
60 kDa inner membrane insertion protein family protein Oryza sativa NM_001055291
Glyceraldehyde-3-phosphate dehydrogenase (Fragment) Oryza sativa NM_001055382
Similar to splicing coativator subunit SRm 300 Monodelphis domestica XP_001371550.1|
Cysteine synthase, mitocondrial precursor Oryza sativa NM_001052112
TPR-like domain containing protein Oryza sativa NM_001056953
HCO3-transporter Oryza sativa NM_001073581
Banched chain amino-acid aminotransferase-like protein 3 Oryza sativa NM_001049072
Beta tubulin (fragment) Oryza sativa NM_001049296
HAT dimerisation domain containing protein Oryza sativa NC_008402
Urease accessory protein G Oryza sativa NM_001062872
Glycoside hydrolase, family 47 protein Oryza sativa NM_001054615
WRKY transcription factor 82 Oryza sativa DQ298186
Tubby family protein Oryza sativa NM_001062568
Ribosomal protein L41 family protein Oryza sativa NC_008400
Granule-bound starch synthase I, chloroplast precursor Oryza sativa NM_001065985
Putative RNA polymerase I transcription factor RRN3 Oryza sativa dbj|BAD45608.1|
Aconitate hydratase, cytoplasmic (Citrate hydro-lyase) (Aconitase) Oryza sativa NM_001055433
Short chain alcohol dehydrogenase-like Oryza sativa NM_001056212
Putative ubiquitin-conjugating enzyme E2 Oryza sativa dbj|BAD25096.1|
Peptidase s26A signal peptidase I family protein Oryza sativa NM_001074823
Protein of unknown function   
Unknown protein Oryza sativa NM_001068742
Hypothetical protein Oryza sativa AC119292
Hypothetical protein Oryza sativa AP008208
Hypothetical protein Oryza sativa AK243578
Hypothetical protein Oryza sativa NC_008395.1
Hypothetical protein Oryza sativa AP008208
Hypothetical protein Oryza sativa NM_001057104
Hypothetical protein Oryza sativa NC_008395
Hypothetical protein Oryza sativa NM_001074804
Hypothetical protein Oryza sativa NM_001057688
Hypothetical protein Oryza sativa NC_008401.1
Hypothetical protein Oryza sativa NC_008395.1
Hypothetical protein Oryza sativa CR855113
Hypothetical protein Oryza sativa AC145477
Hypothetical protein Oryza sativa AC092556
Hypothetical protein Oryza sativa AK242616
Hypothetical protein Oryza sativa AP008209
Hypothetical protein Oryza sativa NC_008398.1
Hypothetical protein Oryza sativa AC099401
Hypothetical protein Oryza sativa NM_001050487
Hypothetical protein Oryza sativa CT831698
Hypothetical protein Oryza sativa CT828847
Hypothetical protein Oryza sativa CT832865