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Table 3 Proteins identified by peptide mass fingerprinting or de novo sequencing

From: Identification of drought-responsive genes in roots of upland rice (Oryza sativa L)

Spot n° Peptide sequence Protein identification Accession # Score Mr (gel) pI (gel) Mr (cal) pI (cal)
PL 1   Hypothetical protein gi|115452789 138 38.0 6,7 39 6.3
PL2   Hypothetical protein gi|115452789 65 39.0 6.6 39 6.3
PL 3 WAPSPADAAAGR Chitinase gi|407472 56 36.0 6.6 35.5 7.3
PL 7 EHGAPQDENR Zinc-superoxide dismutase gi|22296339 26 15.0 6.4 14.7 5.9
PL 11 GPIQLSFNFNYGPAGR Chain A, Crystal Structure Of Class I Chitinase pdb|2DKV|A 30 37.0 6.2 32.6 5.8
PL 13 AAVGHPDTLGDCPFSQR GSH-dependent dehydroascorbate reductase 1 gi|6939839 43 26.0 6.1 23.5 5.6
PL 20 GTSQVEGVVTLTQDDQGPTTVNVR Putative superoxide dismutase [Cu-Zn] gi|42408425 72 17.0 5.5 20.5 5.7
PL 23   L-ascorbate peroxidase 1, P93404 99 28.0 5.5 27 5.4
PL 24 VATPDQAQEVHDGLR Triosephosphate isomerase gi|553107 49 28.0 5.4 27.5 6.6
PL 27 EFSIPLQDSGHVVGFFGR Salt stress-induced protein gi|158513205 88 11.0 5.0 15.1 5.1
PL 30 MIEDYLVAHPAEYA Pathogenesis-related protein Bet v I gi|9230755 55 18.0 4.9 16.6 4.9
PL 33 ADVGVGPVSWDDTVAAYAESYAAQR Acidic PR-1 type pathogenesis-related protein PR-1 gi|12005673 182 17.5 4.2 17.5 4.5
PL34 WWDTFPANVDGAR Hypothetical protein gi|115461070 87 29.0 4.7 27.2 5.0
PL 38   Ascorbate peroxidase NP_001060741 74 32.0 5.2 27 5.2
PL 43 MTAEIGEQVQIVGDDLLVTNPTR Enolase gi|780372 88 60.0 5.4 47.9 5.4
PL 46   Enolase Q42971 74 50.0 5.4 47.9 5.4
PL 45   Hypothetical protein gi|115465323 98 60.0 5.2 58.8 5.9
PL 51 KADATVAGDDR Hypothetical protein gi|125557770 37 45.0 5.7 95.7 8.0
PL 57 AGYAPPHWVQPGQGDR Hypothetical protein gi|125532459| 73 25.0 4.2 24.5 4.6
PL 60 ELFEQLLLHR Chitinase gi|561873 51 36.5 4.2 34.3 4.4
PL 63 ELVADDEWLNTEFISTVQQR Cytosolic malate dehydrogenase gi|115482534 66 37.5 5.9 35.5 5.75
PL 40 EFSIPLQDSGHVVGFFGR Salt stress-induced protein gi|158513205 104 39 5.3 15.1 5.1
   Hypothetical protein EAY73933     40.6 8.6