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Table 2 Genes which were significantly down-regulated at any time point. Numbers indicate fold change at that time point.

From: Transcriptional response of Mexican axolotls to Ambystoma tigrinum virus (ATV) infection

ID

NAME

24 hr

72 hr

144 hr

transcription

    

SRV_04230_at

CHROMOSOME X OPEN READING FRAME 15

0.73

0.44

0.50

SRV_01344_a_at

INTERFERON REGULATORY FACTOR 2

1.02

0.47

0.50

SRV_01768_a_at

TAF9 RNA POLYMERASE II, TATA BOX BINDING PROTEIN (TBP)-ASSOCIATED FACTOR, 32 KDA

0.84

0.44

0.50

SRV_03843_a_at

MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION, SUBUNIT 31 HOMOLOG (YEAST)

0.95

0.50

0.45

SRV_01892_at

ZINC FINGER PROTEIN 282

0.98

0.39

0.42

translation

    

SRV_03800_a_at

MITOCHONDRIAL RIBOSOMAL PROTEIN S7

1.13

0.50

0.54

SRV_03598_at

MITOCHONDRIAL RIBOSOMAL PROTEIN L19

0.73

0.49

0.53

SRV_04607_at

PEPTIDE DEFORMYLASE-LIKE PROTEIN

1.01

0.46

0.50

SRV_04925_a_at

HYPOTHETICAL PROTEIN MGC11102

1.01

0.43

0.48

SRV_01958_at

EUKARYOTIC TRANSLATION INITIATION FACTOR 4E BINDING PROTEIN 3

1.05

0.32

0.31

Natural Killer cell mediated cytotoxicity

    

AE_at

TUBULIN, BETA 2C

0.88

0.52

0.49

Apoptosis

    

SRV_11815_at

CASP2 AND RIPK1 DOMAIN CONTAINING ADAPTOR WITH DEATH DOMAIN

0.70

0.45

0.52

SRV_01489_at

PRKC, APOPTOSIS, WT1, REGULATOR

0.88

0.43

0.44

ion binding/transport

    

SRV_03020_at

TRAF-TYPE ZINC FINGER DOMAIN CONTAINING 1

0.85

0.49

0.53

SRV_01742_at

SPECTRIN, ALPHA, NON-ERYTHROCYTIC 1 (ALPHA-FODRIN)

0.82

0.46

0.52

SRV_02131_a_at

PEPTIDASE (MITOCHONDRIAL PROCESSING) BETA

0.80

0.48

0.51

SRV_02733_at

MITOCHONDRIAL INTERMEDIATE PEPTIDASE

0.59

0.39

0.40

SRV_04112_at

HYPOTHETICAL PROTEIN FLJ20699

0.93

0.42

0.39

SRV_00559_a_at

PRIMASE, POLYPEPTIDE 1, 49 KDA

0.79

0.42

0.39

SRV_03126_at

RING FINGER PROTEIN 113A

0.95

0.39

0.39

SRV_03759_at

ATP SYNTHASE, H+ TRANSPORTING, MITOCHONDRIAL F0 COMPLEX, SUBUNIT S (FACTOR B)

0.91

0.30

0.25

SRV_01177_a_at

ECTONUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASE 1

1.19

0.52

0.49

SRV_04638_a_at

MEMBRANE-ASSOCIATED RING FINGER (C3HC4) 7

0.78

0.44

0.47

SRV_03403_at

MAKORIN, RING FINGER PROTEIN, 1

1.02

0.55

0.48

SRV_02137_at

GUANINE DEAMINASE

0.93

0.36

0.36

SRV_12156_at

TUMOR PROTEIN D52

0.93

0.58

0.45

SRV_02173_at

CHONDROITIN SULFATE PROTEOGLYCAN 3 (NEUROCAN)

1.38

0.57

0.20

metabolic process

    

SRV_02346_a_at

GLUTATHIONE S-TRANSFERASE OMEGA 1

1.04

0.54

0.47

SRV_04215_at

PHOSPHOGLUCOMUTASE 2

1.08

0.57

0.46

SRV_04397_at

NITRILASE FAMILY, MEMBER 2

0.86

0.49

0.46

SRV_03369_at

NON-METASTATIC CELLS 7, PROTEIN EXPRESSED IN (NUCLEOSIDE-DIPHOSPHATE KINASE)

1.00

0.55

0.43

SRV_00123_at

AMINOLEVULINATE, DELTA-, DEHYDRATASE

0.71

0.49

0.31

SRV_00160_s_at

FUMARYLACETOACETATE HYDROLASE (FUMARYLACETOACETASE)

0.83

0.61

0.49

SRV_00135_at

ASPARTOACYLASE (CANAVAN DISEASE)

0.92

0.30

0.22

SRV_01499_at

6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BIPHOSPHATASE 1

0.88

0.65

0.47

SRV_11745_at

ACYL-COENZYME A OXIDASE 3, PRISTANOYL

0.87

0.51

0.47

SRV_03094_at

LIPOIC ACID SYNTHETASE

0.83

0.47

0.47

SRV_05217_a_at

SERINE DEHYDRATASE-LIKE

1.03

0.52

0.33

transport

    

SRV_03906_at

HEMATOPOIETIC STEM/PROGENITOR CELLS 176

0.81

0.49

0.58

SRV_04743_a_at

HYPOTHETICAL PROTEIN FLJ22028

0.98

0.54

0.50

SRV_02065_a_at

ADAPTOR-RELATED PROTEIN COMPLEX 2, MU 1 SUBUNIT

0.90

0.59

0.48

SRV_03218_a_at

GABA(A) RECEPTOR-ASSOCIATED PROTEIN-LIKE 2

0.93

0.28

0.37

SRV_05300_a_at

SFT2 DOMAIN CONTAINING 2

0.91

0.31

0.29

SRV_05537_a_at

TRAFFICKING PROTEIN PARTICLE COMPLEX 6B

0.95

0.49

0.34

SRV_02033_a_at

SELENIUM BINDING PROTEIN 1

1.05

0.58

0.45

protein binding/modification

    

SRV_04235_at

hypothetical protein FLJ11280

0.68

0.44

0.56

SRV_02678_a_at

M-PHASE PHOSPHOPROTEIN 6

0.84

0.45

0.51

SRV_02198_a_at

GLUTAMYL-PROLYL-TRNA SYNTHETASE

0.94

0.52

0.48

SRV_01481_at

PHOSPHATIDYLETHANOLAMINE BINDING PROTEIN 1

1.05

0.56

0.49

SRV_01495_at

PYRUVATE DEHYDROGENASE KINASE, ISOZYME 2

1.04

0.41

0.31

SRV_04077_a_at

UBIQUITIN-CONJUGATING ENZYME E2R 2

0.78

0.51

0.47

SRV_04977_s_at

CNDP DIPEPTIDASE 2 (METALLOPEPTIDASE M20 FAMILY)

1.27

0.49

0.22

SRV_04977_at

CNDP DIPEPTIDASE 2 (METALLOPEPTIDASE M20 FAMILY)

1.20

0.46

0.22

SRV_01825_at

UBIQUITIN-CONJUGATING ENZYME E2B (RAD6 HOMOLOG)

0.90

0.47

0.51

RNA binding/processing

    

SRV_03823_at

RNA BINDING MOTIF PROTEIN, X-LINKED 2

0.80

0.47

0.54

SRV_03721_at

SYF2 HOMOLOG, RNA SPLICING FACTOR (S. CEREVISIAE)

0.96

0.46

0.49

SRV_03417_at

MITOCHONDRIAL RIBOSOMAL PROTEIN S28

0.86

0.51

0.47

SRV_03836_at

EXOSOME COMPONENT 1

1.03

0.46

0.46

cell cycle/cell division

    

SRV_05218_a_at

COILED-COIL DOMAIN CONTAINING 5 (SPINDLE ASSOCIATED)

0.68

0.36

0.46

SRV_03244_a_at

FREQUENTLY REARRANGED IN ADVANCED T-CELL LYMPHOMAS 2

0.89

0.38

0.46

SRV_05024_at

ZW10 INTERACTOR

0.96

0.41

0.44

SRV_00804_at

CDC6 CELL DIVISION CYCLE 6 HOMOLOG (S. CEREVISIAE)

0.70

0.50

0.42

SRV_03256_at

TPX2, MICROTUBULE-ASSOCIATED, HOMOLOG (XENOPUS LAEVIS)

0.91

0.41

0.51

SRV_04156_at

CELL DIVISION CYCLE ASSOCIATED 8

0.71

0.43

0.50

SRV_03593_at

DISCS, LARGE HOMOLOG 7 (DROSOPHILA)

0.66

0.39

0.49

SRV_14350_at

NIMA (NEVER IN MITOSIS GENE A)-RELATED KINASE 3

0.96

0.42

0.30

SRV_02556_at

SMC4 STRUCTURAL MAINTENANCE OF CHROMOSOMES 4-LIKE 1 (YEAST)

0.69

0.43

0.47

SRV_03257_at

TPX2, MICROTUBULE-ASSOCIATED, HOMOLOG (XENOPUS LAEVIS)

0.79

0.35

0.45

SRV_02235_at

KINESIN FAMILY MEMBER 11

0.53

0.31

0.44

SRV_01290_at

FERRITIN, HEAVY POLYPEPTIDE 1

1.00

0.54

0.42

SRV_02151_a_at

CENTRIN, EF-HAND PROTEIN, 2

0.65

0.39

0.39

SRV_04253_a_at

NUCLEOLAR AND SPINDLE ASSOCIATED PROTEIN 1

0.62

0.28

0.37

SRV_05141_at

CYCLIN-DEPENDENT KINASE INHIBITOR 2C (P18, INHIBITS CDK4)

0.85

0.57

0.37

SRV_00033_copy4_at

T-cell acute lymphocytic leukemia 1

1.02

0.47

0.36

SRV_00033_at

T-cell acute lymphocytic leukemia 1

0.97

0.44

0.35

SRV_00033_copy2_at

T-cell acute lymphocytic leukemia 1

0.96

0.46

0.34

SRV_00033_copy1_at

T-cell acute lymphocytic leukemia 1

0.96

0.44

0.33

SRV_00033_copy3_at

T-cell acute lymphocytic leukemia 1

0.94

0.44

0.33

membrane

    

SRV_04260_at

CHROMOSOME 9 OPEN READING FRAME 46

1.05

0.56

0.47

SRV_04763_at

CHROMOSOME 10 OPEN READING FRAME 57

1.24

0.46

0.42

SRV_04650_a_at

TRANSMEMBRANE 6 SUPERFAMILY MEMBER 1

1.00

0.47

0.32

SRV_05571_a_at

OXIDATION RESISTANCE 1

0.77

0.37

0.42

SRV_03611_a_at

TRANSLOCASE OF OUTER MITOCHONDRIAL MEMBRANE 70 HOMOLOG A (YEAST)

0.97

0.55

0.48

kinase activity

    

SRV_05333_at

RIO kinase 3 (yeast)

1.06

0.47

0.52

SRV_05450_a_at

INTEGRIN BETA 1 BINDING PROTEIN 3

0.87

0.53

0.46

SRV_01863_at

VACCINIA RELATED KINASE 1

0.61

0.39

0.51

pinocytosis/endocytosis

    

SRV_00866_at

DISABLED HOMOLOG 2, MITOGEN-RESPONSIVE PHOSPHOPROTEIN (DROSOPHILA)

0.84

0.49

0.43

DNA damage

    

SRV_04199_at

NEI ENDONUCLEASE VIII-LIKE 3 (E. COLI)

0.75

0.41

0.37

SRV_02222_at

HUS1 CHECKPOINT HOMOLOG (S. POMBE)

0.72

0.45

0.57

muscle development/contraction

    

SRV_01033_a_at

INTERFERON-RELATED DEVELOPMENTAL REGULATOR 1

1.18

0.38

0.53

SRV_05143_a_at

MYOSIN, LIGHT POLYPEPTIDE 1, ALKALI; SKELETAL, FAST

0.79

0.50

0.49

SRV_00058_s_at

tropomyosin

0.89

0.53

0.48

other

    

SRV_01932_a_at

FICOLIN (COLLAGEN/FIBRINOGEN DOMAIN CONTAINING) 3 (HAKATA ANTIGEN)

1.03

0.58

0.46

SRV_05356_s_at

FAMILY WITH SEQUENCE SIMILARITY 58, MEMBER A

0.89

0.46

0.47

SRV_02972_at

GLUTAREDOXIN 5 HOMOLOG (S. CEREVISIAE)

0.97

0.49

0.49

SRV_05356_at

FAMILY WITH SEQUENCE SIMILARITY 58, MEMBER A

1.09

0.58

0.58

SRV_05263_at

SOLUTE CARRIER FAMILY 39 (ZINC TRANSPORTER), MEMBER 3

0.73

0.45

0.51

SRV_04739_a_at

ZINC FINGER PROTEIN 403

0.97

0.49

0.51

SRV_03830_at

SHWACHMAN-BODIAN-DIAMOND SYNDROME

0.94

0.47

0.46

SRV_03448_at

COILED-COIL DOMAIN CONTAINING 59

0.89

0.42

0.44

SRV_02223_a_at

ISOPENTENYL-DIPHOSPHATE DELTA ISOMERASE 1

0.89

0.37

0.43

SRV_04160_at

SDA1 DOMAIN CONTAINING 1

0.88

0.48

0.42

SRV_05216_at

SERUM AMYLOID A-LIKE 1

0.82

0.42

0.42

SRV_04991_a_at

MYC INDUCED NUCLEAR ANTIGEN

0.90

0.41

0.39

SRV_00134_a_at

ARGININOSUCCINATE LYASE

1.10

0.44

0.36

SRV_05376_at

WILLIAMS BEUREN SYNDROME CHROMOSOME REGION 27

0.84

0.36

0.31