Experimental analysis of oligonucleotide microarray design criteria to detect deletions by comparative genomic hybridization

Table 2 Number of oligonucleotides for each category represented on the arrays.

Species	Oligonucleotide Length	Perfect Match	Perturbed oligonucleotides
			Random Shuffling	Random Mismatches	Perfect Stretch
C. elegans	50	76305	3815	9854	7618
	60	76463	3814	16140	12468
	70	75223	2232	10714	6431
	Isothermal	75439	3586	0	0
Human	50	75769	3171	10268	8294
	60	75784	3166	14448	11658
	70	75805	1841	13344	8280
	Isothermal	75530	2812	0	0

ISSN: 1471-2164