Skip to main content

Advertisement

Table 1 Genes upregulated by TSA treatment in F9 cells (representative genes from total of 226 genes at 2-fold level of expression)

From: Histone deacetylase inhibitors: A new mode for inhibition of cholesterol metabolism

Treatment type EtOH TSA   
Systematic FC Norm SE Norm SE Gene GB Acc
93714_f_at 14.5 1.64 1.0 23.82 3.1 H2-L AI117211
100127_at 18.0 1.08 0.2 19.37 3.4 CRABP2 M35523
92770_at 18.3 0.83 0.2 15.28 2.0 S100A6 X66449
95471_at 23.2 0.75 0.3 17.30 2.4 CDKN1C U22399
93981_at 12.8 1.07 0.3 13.72 3.0 PLAT J03520
92275_at 10.2 1.00 0.3 10.16 0.5 TCFAP2C X94694
92502_at 7.6 1.00 0.1 7.60 0.8 ZAC1 X95504
100139_at 6.6 0.92 0.3 6.11 0.7 PCSK1N AI841733
98758_at 6.0 0.82 0.2 4.92 0.4 ALOX15 L34570
160547_s_at 5.7 0.98 0.1 5.60 0.7 TXNIP AI839138
94545_at 5.5 1.02 0.2 5.60 0.1 RTN1 AW123115
99906_at 4.8 0.93 0.2 4.48 0.4 ESX1 AF085715
93875_at 4.7 1.03 0.2 4.84 0.9 HSP70-3 M12571
161482_f_at 4.7 1.21 0.2 5.65 1.1 PRPH1 AV068234
104716_at 3.8 0.99 0.2 3.82 0.1 RBP1 X60367
99642_i_at 3.6 0.94 0.2 3.40 0.2 CPE X61232
94881_at 3.3 0.77 0.3 2.59 0.1 CDKN1A AW048937
99643_f_at 3.2 0.99 0.1 3.16 0.3 CPE X61232
98067_at 3.2 0.77 0.2 2.43 0.1 CDKN1A U09507
92501_s_at 3.0 1.01 0.2 3.04 0.5 ZAC1 X95503
93120_f_at 2.9 1.04 0.1 3.01 0.3 H2-K; H-2K V00746
97487_at 2.8 0.94 0.1 2.60 0.2 SERPINE2 X70296
96704_at 2.6 0.95 0.1 2.52 0.4 SFN AF058798
93888_at 2.5 0.84 0.2 2.10 0.1 HOXB1; HOX-2.9 X53063
95297_at 2.3 1.06 0.3 2.48 0.3 HOXA1 M22115
93278_at 2.1 1.03 0.2 2.21 0.6 SCP2 M91458
104580_at 2.1 0.79 0.2 1.67 0.1 PLCD U85711
  1. FC: fold change; Norm: Normalized signal, SE: std error of normalized signal; GB Acc: GeneBank Accession number