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Table 2 Genes downregulated by TSA treatment in F9 cells (representative genes from total of 237 genes at 2-fold level of expression)

From: Histone deacetylase inhibitors: A new mode for inhibition of cholesterol metabolism

Treatment type EtOH TSA   
Systematic FC Norm SE Norm SE Gene GB Acc
92889_r_at -25.8 1.00 0.2 0.04 0.05 FOXD3 AF067421
100700_s_at -6.3 0.97 0.1 0.15 0.06 NR5A1 AB000490
94712_at -5.3 1.15 0.2 0.22 0.08 VEGFC U73620
101578_f_at -4.9 1.25 0.44 0.26 0.09 ACTB M12481
99963_at -4.6 1.26 0.28 0.28 0.11 ZFP101 U07861
93731_at -4.5 0.96 0.13 0.21 0.07 FKBP9 AF090334
100701_r_at -3.8 0.94 0.1 0.25 0.07 NR5A1 AB000490
99323_at -3.7 1.01 0.1 0.27 0.10 IL12RB2 U64199
98817_at -3.7 1.02 0.2 0.28 0.11 FST Z29532
99058_at -3.7 1.05 0.2 0.29 0.11 HMGA2 X99915
95632_f_at -3.3 0.91 0.3 0.28 0.08 MVK AW122653
93002_r_at -3.2 0.86 0.2 0.27 0.07 TDGF1 M87321
102220_at -2.8 0.90 0.1 0.33 0.08 UTF1; AI505934 AB017360
160737_at -2.7 1.13 0.2 0.41 0.07 LSS AW060927
99425_at -2.6 0.91 0.2 0.35 0.07 HMGCR X07888
93065_at -2.6 1.17 0.23 0.45 0.12 IL11RA1 U14412
103683_at -2.5 0.90 0.2 0.35 0.07 DHODH AF029667
104285_at -2.3 1.02 0.2 0.44 0.08 HMGCR M62766
160832_at -2.3 0.97 0.16 0.43 0.06 LDLR Z19521
98575_at -2.2 1.06 0.2 0.48 0.08 FASN X13135
94322_at -2.2 0.97 0.1 0.44 0.07 SQLE D42048
93234_at -2.1 1.11 0.2 0.52 0.07 MSC AF087035
  1. FC: fold change; Norm: Normalized signal, SE: std error of normalized signal; GB Acc: GeneBank Accession number